RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 C17orf82Q86X59 251 aaPredicted RBP3.85□□□□□ -1.79
SKP1-202ENST00000353411 COX7B2Q8TF08 81 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 NDUFS5O43920 106 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 XCL1P47992 114 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 C20orf203Q8NBC4 194 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 XCL2Q9UBD3 114 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 HIGD2BQ4VC39 106 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 IGKV1D-37A0A075B6S9 117 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 Q8N7P7 452 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 ITLN2Q8WWU7 325 aaPredicted RBP3.85□□□□□ -1.79
SKP1-202ENST00000353411 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 A0A0G2JNJ9 132 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 FGF23Q9GZV9 251 aaPredicted RBP3.85□□□□□ -1.79
SKP1-202ENST00000353411 Q9UFV3 132 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 NDUFA1O15239 70 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 C7orf69Q9H7B7 122 aa3.85□□□□□ -1.79
SKP1-202ENST00000353411 LINC00308Q8TCZ7 52 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 TPSG1Q9NRR2 321 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 NDUFA4O00483 81 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 SMCPP49901 116 aaPredicted RBP3.84□□□□□ -1.79
SKP1-202ENST00000353411 SPRNQ5BIV9 151 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 SPRY2O43597 315 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 BCE1O60756 84 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 GYPEP15421 78 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 NRACQ8N912 160 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 PCNTO95613 3336 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 COL4A4P53420 1690 aaPredicted RBP3.84□□□□□ -1.79
SKP1-202ENST00000353411 EIF4EBP3O60516 100 aaPredicted RBP3.84□□□□□ -1.79
SKP1-202ENST00000353411 IGLV2-11P01706 119 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 CRIP2P52943 208 aaPredicted RBP3.84□□□□□ -1.79
SKP1-202ENST00000353411 VMO1Q7Z5L0 202 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 TRBV7-6A0A0J9YX20 115 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 A6NED7 52 aa3.84□□□□□ -1.79
SKP1-202ENST00000353411 TRGV1A0A0A0MS02 117 aa3.84□□□□□ -1.8
SKP1-202ENST00000353411 K7EIM0 57 aa3.84□□□□□ -1.8
SKP1-202ENST00000353411 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.8
SKP1-202ENST00000353411 VWCEQ96DN2 955 aa3.84□□□□□ -1.8
SKP1-202ENST00000353411 GNRH2O43555 120 aa3.84□□□□□ -1.8
SKP1-202ENST00000353411 ZNF71Q9NQZ8 489 aaPredicted RBP3.84□□□□□ -1.8
SKP1-202ENST00000353411 C9orf106Q8NAJ2 232 aa3.84□□□□□ -1.8
SKP1-202ENST00000353411 BRWD1-AS2P59051 145 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 JMJD1CQ15652 2540 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 IGHV3-11P01762 117 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 WT1P19544 449 aaPredicted RBP3.83□□□□□ -1.8
SKP1-202ENST00000353411 GNLYP22749 145 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CCL19Q99731 98 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 ZNRD1Q9P1U0 126 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CMC4P56277 68 aaPredicted RBP3.83□□□□□ -1.8
SKP1-202ENST00000353411 C11orf53Q8IXP5 236 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CRIP1P50238 77 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 AKAP13Q12802 2813 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 TRBV10-3A0A0K0K1G6 114 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 PINLYPA6NC86 204 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CCKP06307 115 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 SPRR3Q9UBC9 169 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 A0A096LNJ9 63 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
SKP1-202ENST00000353411 Q6ZS46 218 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 CHKB-CPT1BH3BT56 60 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 NCR3O14931 201 aa3.83□□□□□ -1.8
SKP1-202ENST00000353411 LOXP28300 417 aaPredicted RBP3.83□□□□□ -1.8
SKP1-202ENST00000353411 RNASE6Q93091 150 aaKnown RBP3.83□□□□□ -1.8
SKP1-202ENST00000353411 CRYGDP07320 174 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 PLAC8L1A1L4L8 177 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
SKP1-202ENST00000353411 IGKV2-29A2NJV5 120 aaPredicted RBP3.82□□□□□ -1.8
SKP1-202ENST00000353411 LINC01546A6NGU7 62 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 LHBP01229 141 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 PRSS33Q8NF86 280 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 BPY2O14599 106 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 CD164Q04900 197 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 MIR7-3HGQ8N6C7 128 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.82□□□□□ -1.8
SKP1-202ENST00000353411 ESRGQ1W209 222 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 IGHV4-4A0A075B6R2 117 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 PLA2G2CQ5R387 149 aa3.82□□□□□ -1.8
SKP1-202ENST00000353411 IGLV11-55A0A075B6I3 123 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 ZNF503-AS2A6NEH8 195 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 LY6EQ16553 131 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 ZNF80P51504 273 aaPredicted RBP3.81□□□□□ -1.8
SKP1-202ENST00000353411 TRBV27A0A0K0K1C4 114 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 FAM27E3Q08E93 113 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 SPINK13Q1W4C9 94 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 PRO3102Q9H379 93 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 KAAG1Q9UBP8 84 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 IGLV2-23P01705 113 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 KLK9Q9UKQ9 250 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 DNAH12Q6ZR08 3092 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 PRYO14603 147 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 SEM1Q6ZVN7 128 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 PIP4P1Q86T03 277 aa3.81□□□□□ -1.8
SKP1-202ENST00000353411 IGLV1-44P01699 117 aa3.8□□□□□ -1.8
SKP1-202ENST00000353411 PRB1P04280 392 aa3.8□□□□□ -1.8
SKP1-202ENST00000353411 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
SKP1-202ENST00000353411 NPBQ8NG41 125 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms