RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 SPAG11BQ08648 103 aa12.89□□□□□ -0.35
DUSP4-201ENST00000240100 HIST2H2BDQ6DRA6 164 aa12.89□□□□□ -0.35
DUSP4-201ENST00000240100 DNAJC9-AS1A6NH13 148 aa12.89□□□□□ -0.35
DUSP4-201ENST00000240100 ABCA4P78363 2273 aa12.89□□□□□ -0.35
DUSP4-201ENST00000240100 PSMB8P28062 276 aa12.88□□□□□ -0.35
DUSP4-201ENST00000240100 LINC00310P59036 64 aa12.88□□□□□ -0.35
DUSP4-201ENST00000240100 PYGO1Q9Y3Y4 419 aa12.88□□□□□ -0.35
DUSP4-201ENST00000240100 Q9HAA7 133 aa12.88□□□□□ -0.35
DUSP4-201ENST00000240100 SMIM20Q8N5G0 67 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 DIRC1Q969H9 104 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
DUSP4-201ENST00000240100 CPAMD8Q8IZJ3 1885 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 UBE2BP63146 152 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 DEFB114Q30KQ6 69 aa12.87□□□□□ -0.35
DUSP4-201ENST00000240100 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
DUSP4-201ENST00000240100 TIRAPP58753 221 aa12.86□□□□□ -0.35
DUSP4-201ENST00000240100 RBM3P98179 157 aaKnown RBP12.86□□□□□ -0.35
DUSP4-201ENST00000240100 Q6ZTI0 123 aa12.86□□□□□ -0.35
DUSP4-201ENST00000240100 PDE6GP18545 87 aa12.86□□□□□ -0.35
DUSP4-201ENST00000240100 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
DUSP4-201ENST00000240100 IGHV4-31P0DP07 118 aa12.85□□□□□ -0.35
DUSP4-201ENST00000240100 Q8N976 141 aa12.85□□□□□ -0.35
DUSP4-201ENST00000240100 CDKN2A-AS1Q9UH64 79 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 TTC28Q96AY4 2481 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 DOPEY2Q9Y3R5 2298 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
DUSP4-201ENST00000240100 RBX1P62877 108 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 DEFB135Q30KP9 77 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 C11orf21Q9P2W6 132 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 ESM1Q9NQ30 184 aa12.84□□□□□ -0.35
DUSP4-201ENST00000240100 CCL18P55774 89 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 HCFC1P51610 2035 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 NBASA2RRP1 2371 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 J3KT08 172 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 TIMM17BO60830 172 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 KLLNB2CW77 178 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 NREPQ16612 68 aa12.83□□□□□ -0.36
DUSP4-201ENST00000240100 PRR9Q5T870 116 aa12.82□□□□□ -0.36
DUSP4-201ENST00000240100 LINC00308Q8TCZ7 52 aa12.82□□□□□ -0.36
DUSP4-201ENST00000240100 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
DUSP4-201ENST00000240100 SMIM9A6NGZ8 99 aa12.82□□□□□ -0.36
DUSP4-201ENST00000240100 MT-ATP8P03928 68 aa12.82□□□□□ -0.36
DUSP4-201ENST00000240100 TSHBP01222 138 aa12.81□□□□□ -0.36
DUSP4-201ENST00000240100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.36
DUSP4-201ENST00000240100 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
DUSP4-201ENST00000240100 TRIAP1O43715 76 aa12.81□□□□□ -0.36
DUSP4-201ENST00000240100 C14orf132Q9NPU4 83 aa12.81□□□□□ -0.36
DUSP4-201ENST00000240100 KLK12Q9UKR0 248 aa12.81□□□□□ -0.36
DUSP4-201ENST00000240100 URB1-AS1Q96HZ7 61 aa12.8□□□□□ -0.36
DUSP4-201ENST00000240100 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
DUSP4-201ENST00000240100 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
DUSP4-201ENST00000240100 NDUFV3P56181 108 aaKnown RBP12.8□□□□□ -0.36
DUSP4-201ENST00000240100 TRAV26-1A0A087WT03 109 aa12.79□□□□□ -0.36
DUSP4-201ENST00000240100 LYRM9A8MSI8 78 aa12.79□□□□□ -0.36
DUSP4-201ENST00000240100 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
DUSP4-201ENST00000240100 UFSP1Q6NVU6 142 aa12.79□□□□□ -0.36
DUSP4-201ENST00000240100 COX7BP24311 80 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 PLCE1Q9P212 2302 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 IGLV1-40P01703 118 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 PSMG3-AS1Q96PY0 264 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
DUSP4-201ENST00000240100 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
DUSP4-201ENST00000240100 DEFB4AO15263 64 aa12.77□□□□□ -0.37
DUSP4-201ENST00000240100 RNF183Q96D59 192 aa12.77□□□□□ -0.37
DUSP4-201ENST00000240100 REG3AQ06141 175 aa12.76□□□□□ -0.37
DUSP4-201ENST00000240100 ZNF702PQ9H963 129 aa12.75□□□□□ -0.37
DUSP4-201ENST00000240100 HIGD2BQ4VC39 106 aa12.75□□□□□ -0.37
DUSP4-201ENST00000240100 LINC00269Q8N2A0 174 aa12.75□□□□□ -0.37
DUSP4-201ENST00000240100 MED13LQ71F56 2210 aa12.75□□□□□ -0.37
DUSP4-201ENST00000240100 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
DUSP4-201ENST00000240100 FAM222AQ5U5X8 452 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 COX8CQ7Z4L0 72 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 TNCP24821 2201 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 PIK3CD-AS1Q5SR53 167 aa12.74□□□□□ -0.37
DUSP4-201ENST00000240100 PROK1P58294 105 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 ATP5EP2Q5VTU8 51 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 DCANP1Q8TF63 244 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 IGHV4-28A0A0C4DH34 117 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 CRYGDP07320 174 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 CHCHD10Q8WYQ3 142 aaPredicted RBP12.73□□□□□ -0.37
DUSP4-201ENST00000240100 SPATA25Q9BR10 227 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 UBE2D4Q9Y2X8 147 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 C10orf99Q6UWK7 81 aa12.73□□□□□ -0.37
DUSP4-201ENST00000240100 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
DUSP4-201ENST00000240100 MP68P56378 58 aa12.72□□□□□ -0.37
DUSP4-201ENST00000240100 Q6ZSV7 163 aa12.72□□□□□ -0.37
DUSP4-201ENST00000240100 EXPH5Q8NEV8 1989 aa12.71□□□□□ -0.38
DUSP4-201ENST00000240100 UQCRQO14949 82 aa12.71□□□□□ -0.38
DUSP4-201ENST00000240100 CRIP2P52943 208 aaPredicted RBP12.7□□□□□ -0.38
DUSP4-201ENST00000240100 UPK3BQ9BT76 320 aa12.7□□□□□ -0.38
DUSP4-201ENST00000240100 NDUFS5O43920 106 aa12.69□□□□□ -0.38
DUSP4-201ENST00000240100 IGIPA6NJ69 53 aa12.69□□□□□ -0.38
DUSP4-201ENST00000240100 NDUFB1O75438 58 aa12.69□□□□□ -0.38
DUSP4-201ENST00000240100 ZNF843Q8N446 348 aa12.69□□□□□ -0.38
DUSP4-201ENST00000240100 LST1O00453 97 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms