RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
SCNN1A-201ENST00000228916 CFHR3Q02985 330 aa10.27□□□□□ -0.77
SCNN1A-201ENST00000228916 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.77
SCNN1A-201ENST00000228916 H3BUX3 64 aa10.26□□□□□ -0.77
SCNN1A-201ENST00000228916 TMEM61Q8N0U2 210 aa10.26□□□□□ -0.77
SCNN1A-201ENST00000228916 SPINK13Q1W4C9 94 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 Q6ZSV7 163 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 CHD8Q9HCK8 2581 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 CLEC2BQ92478 149 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 NCOR2Q9Y618 2525 aa10.25□□□□□ -0.77
SCNN1A-201ENST00000228916 IGHV4-61A0A0C4DH41 118 aa10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 TINCRA0A1B0GVN0 87 aa10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 UCNP55089 124 aa10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 K7EQG2 157 aa10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 CEMP1Q6PRD7 247 aaPredicted RBP10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 RNF152Q8N8N0 203 aa10.24□□□□□ -0.77
SCNN1A-201ENST00000228916 TRGV11A0A075B6L2 103 aa10.23□□□□□ -0.77
SCNN1A-201ENST00000228916 TIMM17BO60830 172 aa10.23□□□□□ -0.77
SCNN1A-201ENST00000228916 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
SCNN1A-201ENST00000228916 SPTBN4Q9H254 2564 aa10.23□□□□□ -0.77
SCNN1A-201ENST00000228916 A8MZ25 164 aa10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 RNASE13Q5GAN3 156 aaKnown RBP10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 LY6DQ14210 128 aa10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 TRBV7-7A0A0K0K1E9 115 aa10.22□□□□□ -0.77
SCNN1A-201ENST00000228916 NPC2P61916 151 aa10.21□□□□□ -0.77
SCNN1A-201ENST00000228916 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
SCNN1A-201ENST00000228916 PROK1P58294 105 aa10.21□□□□□ -0.78
SCNN1A-201ENST00000228916 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.78
SCNN1A-201ENST00000228916 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.78
SCNN1A-201ENST00000228916 PSMB8P28062 276 aa10.2□□□□□ -0.78
SCNN1A-201ENST00000228916 FAM110AQ9BQ89 295 aa10.2□□□□□ -0.78
SCNN1A-201ENST00000228916 IGHV3-73A0A0B4J1V6 119 aa10.2□□□□□ -0.78
SCNN1A-201ENST00000228916 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
SCNN1A-201ENST00000228916 RBMY1A1P0DJD3 496 aaKnown RBP10.19□□□□□ -0.78
SCNN1A-201ENST00000228916 RBMY1CP0DJD4 496 aa10.19□□□□□ -0.78
SCNN1A-201ENST00000228916 RBMY1FQ15415 496 aaKnown RBP10.19□□□□□ -0.78
SCNN1A-201ENST00000228916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.19□□□□□ -0.78
SCNN1A-201ENST00000228916 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 C10orf99Q6UWK7 81 aa10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 Q9UF83 564 aa10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 SPG11Q96JI7 2443 aa10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 NDUFA1O15239 70 aa10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 PIMREGQ9BSJ6 248 aa10.18□□□□□ -0.78
SCNN1A-201ENST00000228916 NACAE9PAV3 2078 aa10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 SORL1Q92673 2214 aa10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 MEIG1Q5JSS6 88 aa10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 DAND5Q8N907 189 aa10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
SCNN1A-201ENST00000228916 AVPP01185 164 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 SMIM20Q8N5G0 67 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 CSPG4Q6UVK1 2322 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 CUBNO60494 3623 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 ACYP1P07311 99 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 TIRAPP58753 221 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 Q6ZSN1 163 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 LINC00467Q9BRT7 94 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
SCNN1A-201ENST00000228916 IGHV4-30-2A0A087WSY4 118 aa10.15□□□□□ -0.78
SCNN1A-201ENST00000228916 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
SCNN1A-201ENST00000228916 IMUPQ9GZP8 106 aa10.15□□□□□ -0.78
SCNN1A-201ENST00000228916 ZANQ9Y493 2812 aa10.15□□□□□ -0.79
SCNN1A-201ENST00000228916 KNCNA6PVL3 124 aa10.14□□□□□ -0.79
SCNN1A-201ENST00000228916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.14□□□□□ -0.79
SCNN1A-201ENST00000228916 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
SCNN1A-201ENST00000228916 COX7A2LO14548 114 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 GNLYP22749 145 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 HTN1P15515 57 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 SYNJ2BPP57105 145 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 HERV-K104P63124 156 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 CCL19Q99731 98 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 FLNCQ14315 2725 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 TMEM89A2RUT3 159 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 MSMBP08118 114 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 LINC01587Q99440 93 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 CFAP46Q8IYW2 2715 aa10.13□□□□□ -0.79
SCNN1A-201ENST00000228916 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
SCNN1A-201ENST00000228916 A8MTW9 85 aa10.12□□□□□ -0.79
SCNN1A-201ENST00000228916 SHISA2Q6UWI4 295 aa10.12□□□□□ -0.79
SCNN1A-201ENST00000228916 DNAJC30Q96LL9 226 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 PRORYQ9H606 182 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 MXRA5Q9NR99 2828 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 DUX5Q96PT3 197 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 IGHV3-53P01767 116 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 IGHV4-59P01825 116 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 PRM2P04554 102 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 COX6A2Q02221 97 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 SMCR5Q8TEV8 140 aa10.11□□□□□ -0.79
SCNN1A-201ENST00000228916 TMEM126AQ9H061 195 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms