RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 SNAPINO95295 136 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 RAB5BP61020 215 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 SLC38A11Q08AI6 406 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 RNASE8Q8TDE3 154 aaKnown RBP2.89□□□□□ -1.95
GABRA1-220ENST00000638159 RELNP78509 3460 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 TRBV10-1A0A0K0K1A3 114 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 NDUFA1O15239 70 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 CEBPGP53567 150 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PRNTQ86SH4 94 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 LINC00269Q8N2A0 174 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PPP1R1CQ8WVI7 109 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 IGKV1-6A0A0C4DH72 117 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 AKR1C3P42330 323 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 SPAG11AQ6PDA7 123 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 GOLT1AQ6ZVE7 132 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 RBKSQ9H477 322 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 B4DEV8 164 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 BCL2L11O43521 198 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 CDS2O95674 445 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 ERCC8Q13216 396 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 ATP6V1FQ16864 119 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 NMSQ5H8A3 153 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PIK3CD-AS1Q5SR53 167 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 Q6ZN92 141 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 TVP23CQ96ET8 276 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 WDR61Q9GZS3 305 aaKnown RBP2.88□□□□□ -1.95
GABRA1-220ENST00000638159 NIT2Q9NQR4 276 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PKHD1L1Q86WI1 4243 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 IGKV2-40A0A087WW87 121 aaPredicted RBP2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PRSS47A8MTI9 375 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 C1orf196B1AJZ1 125 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 IGKV2D-40P01614 121 aaPredicted RBP2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PRM2P04554 102 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 METTL15P1P0C7V9 234 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 XCL1P47992 114 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 RAB32Q13637 225 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 PEA15Q15121 130 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 KHDC3LQ587J8 217 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 OR10G7Q8NGN6 311 aa2.88□□□□□ -1.95
GABRA1-220ENST00000638159 TMEM218A2RU14 115 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 RAB19A4D1S5 217 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 FABP5P3A8MUU1 101 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 SLC17A3O00476 420 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 PDE6HQ13956 83 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 FAM19A5Q7Z5A7 132 aaPredicted RBP2.87□□□□□ -1.95
GABRA1-220ENST00000638159 RPS10P5Q9NQ39 176 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 FAM30AQ9NZY2 134 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 PSG8Q9UQ74 426 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 UBE2L5PA0A1B0GUS4 154 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 MLANAQ16655 118 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 PRR26Q8N8Z3 221 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 CSNK1G2-AS1Q8NCQ2 148 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 TRBV6-1A0A0K0K1D8 114 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 A0A1B0GV50 99 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 C19orf71A6NCJ1 209 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 LINC01546A6NGU7 62 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 IFNA1P01562 189 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 SNRPEP62304 92 aaKnown RBP2.87□□□□□ -1.95
GABRA1-220ENST00000638159 FHL2Q14192 279 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 AKR1C8PQ5T2L2 129 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 SFT2D1Q8WV19 159 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 MRPL18Q9H0U6 180 aaKnown RBP2.87□□□□□ -1.95
GABRA1-220ENST00000638159 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
GABRA1-220ENST00000638159 COX7A2LO14548 114 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 SUMO2P61956 95 aaKnown RBP2.86□□□□□ -1.95
GABRA1-220ENST00000638159 CTAG1AP78358 180 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 CST9LP1Q5W188 147 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 OPRPNQ99935 248 aaPredicted RBP2.86□□□□□ -1.95
GABRA1-220ENST00000638159 EIF5A2Q9GZV4 153 aaKnown RBP2.86□□□□□ -1.95
GABRA1-220ENST00000638159 TRBV7-3A0A075B6L6 115 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 COA6Q5JTJ3 125 aaKnown RBP2.86□□□□□ -1.95
GABRA1-220ENST00000638159 SLC25A29Q8N8R3 303 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 C5orf17Q8NAS9 161 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 SMIM3Q9BZL3 60 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 ZNF331Q9NQX6 463 aaPredicted RBP2.86□□□□□ -1.95
GABRA1-220ENST00000638159 PKHD1P08F94 4074 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 PLAC8L1A1L4L8 177 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 H3BRN7 92 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 H3BVH4 76 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 RAB5AP20339 215 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 FOXI1Q12951 378 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 RHEBQ15382 184 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 LINC01600Q96MT4 127 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 SMCO4Q9NRQ5 59 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 LAMA5O15230 3695 aa2.86□□□□□ -1.95
GABRA1-220ENST00000638159 S100A8P05109 93 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 GATA1P15976 413 aaPredicted RBP2.85□□□□□ -1.95
GABRA1-220ENST00000638159 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 TMEM167BQ9NRX6 74 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 TMEM242Q9NWH2 141 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 E7EUB6 86 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 M0R3E3 92 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 ZNF253O75346 499 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 S100A2P29034 98 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 FABP9Q0Z7S8 132 aa2.85□□□□□ -1.95
GABRA1-220ENST00000638159 TMEM128Q5BJH2 165 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms