RNA–Protein interactions for RNA: ENST00000622329.1

RNU6-538P-201, Transcript of RNA, U6 small nuclear 538, pseudogene, humanhuman

BASIC

Gene RNU6-538P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-538P-201ENST00000622329 KANTRA0A1W2PQU2 76 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 NUPR2A6NF83 97 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 CFDP00746 253 aaPredicted RBP2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 C10orf128Q5T292 105 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 ODF3Q96PU9 254 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 PRO1854Q9UHT4 67 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 RGPD4Q7Z3J3 1758 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 LRRIQ1Q96JM4 1722 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 FANCAO15360 1455 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 MLH3Q9UHC1 1453 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 SHANK2Q9UPX8 1470 aa2.96□□□□□ -1.94
RNU6-538P-201ENST00000622329 LRCOL1A6NCL2 159 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 H7BZZ5 65 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 BCE1O60756 84 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 IGLV6-57P01721 117 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 UBE2D1P51668 147 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 UBE2D3P61077 147 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 UBE2D2P62837 147 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 WFDC2Q14508 124 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 S100ZQ8WXG8 99 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 NCOA2Q15596 1464 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 DIP2BQ9P265 1576 aa2.95□□□□□ -1.94
RNU6-538P-201ENST00000622329 NINQ8N4C6 2090 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 IGHV3-30P01768 117 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 IGHV3-30-5P0DP03 117 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 SMIM11AP58511 58 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 LINC01600Q96MT4 127 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 LIMD2Q9BT23 127 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 HIGD1BQ9P298 99 aa2.94□□□□□ -1.94
RNU6-538P-201ENST00000622329 SUPT6HQ7KZ85 1726 aaKnown RBP2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 PATJQ8NI35 1801 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 TRAV22A0A0B4J277 110 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 A0A0G2JND7 137 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 TEX49A0A1B0GTD5 131 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 SNRPFP62306 86 aaKnown RBP2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 VMO1Q7Z5L0 202 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 Q8N6K4 173 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 PRO0461Q9UI25 63 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 KIF14Q15058 1648 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 SEC16AO15027 2179 aa2.93□□□□□ -1.94
RNU6-538P-201ENST00000622329 COL4A5P29400 1685 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 MICAL3Q7RTP6 2002 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 IGKV3-7A0A075B6H7 116 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 COX6CP09669 75 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 KLKP1Q107X0 134 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 HMGN3Q15651 99 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 KRTAP13-2Q52LG2 175 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 Q5VV11 94 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 PEAK1Q9H792 1746 aa2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 RGPD3A6NKT7 1758 aaPredicted RBP2.92□□□□□ -1.94
RNU6-538P-201ENST00000622329 UNC13BO14795 1591 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 PTPRDP23468 1912 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 TRBV6-4A0A1B0GX49 114 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 CHKB-CPT1BH3BT56 60 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 H3BUT2 72 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 ACYP1P07311 99 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 EDDM3BP56851 147 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 TET3O43151 1660 aa2.91□□□□□ -1.94
RNU6-538P-201ENST00000622329 NWD2Q9ULI1 1742 aa2.9□□□□□ -1.94
RNU6-538P-201ENST00000622329 ZC3H13Q5T200 1668 aaKnown RBP2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 A8MU10 97 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 PMCHL1Q16048 86 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 C18orf32Q8TCD1 76 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 BPESC1Q9GZL8 116 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 CASP8AP2Q9UKL3 1982 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 TANC1Q9C0D5 1861 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 PRRC2AP48634 2157 aaKnown RBP2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 RP1P56715 2156 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 MAP3K4Q9Y6R4 1608 aa2.9□□□□□ -1.95
RNU6-538P-201ENST00000622329 ADAMTS7Q9UKP4 1686 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 SDHAF1A6NFY7 115 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 HIGD1CA8MV81 97 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 F2Z2F3 143 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 PDE6GP18545 87 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 ELOF1P60002 83 aaKnown RBP2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 ZNF56Q15929 161 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 SPATA45Q537H7 98 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 C10orf55Q5SWW7 151 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 PRR9Q5T870 116 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 HEPN1Q6WQI6 88 aa2.89□□□□□ -1.95
RNU6-538P-201ENST00000622329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 TCHHQ07283 1943 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 TRBV25-1A0A075B6N4 114 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 TMEM14DPA8MWL7 114 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 H3BRN7 92 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 PPYP01298 95 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 LINC00643Q86TS7 51 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 DYNLRB1Q9NP97 96 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 UGGT2Q9NYU1 1516 aa2.88□□□□□ -1.95
RNU6-538P-201ENST00000622329 BLMP54132 1417 aaPredicted RBP2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 COL16A1Q07092 1604 aaPredicted RBP2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 LOC285095A0A1B0GVY8 99 aa2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 CLPSL1A2RUU4 121 aa2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 JMJD7-PLA2G4BH0Y9G9 81 aa2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 IGLV3-1P01715 115 aa2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 SSBP1Q04837 148 aaKnown RBP2.87□□□□□ -1.95
RNU6-538P-201ENST00000622329 FAM223AQ8IWN6 122 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms