RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
PCDHA6-203ENST00000529310 PLCE1Q9P212 2302 aa12.04□□□□□ -0.48
PCDHA6-203ENST00000529310 E7EUB6 86 aa12.04□□□□□ -0.48
PCDHA6-203ENST00000529310 MED13Q9UHV7 2174 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 GPHB5Q86YW7 130 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 ODF3L1Q8IXM7 274 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 DEFB1P60022 68 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 UBE2AP49459 152 aa12.03□□□□□ -0.48
PCDHA6-203ENST00000529310 SEM1Q6ZVN7 128 aa12.02□□□□□ -0.48
PCDHA6-203ENST00000529310 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.48
PCDHA6-203ENST00000529310 LINC00643Q86TS7 51 aa12.02□□□□□ -0.48
PCDHA6-203ENST00000529310 EP400Q96L91 3159 aa12.02□□□□□ -0.49
PCDHA6-203ENST00000529310 PROP1O75360 226 aa12.02□□□□□ -0.49
PCDHA6-203ENST00000529310 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 PDE6GP18545 87 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 ZGRF1Q86YA3 2104 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 MDFICQ9P1T7 246 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 TCL1BO95988 128 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 NFE4Q86UQ8 179 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 NOTCH2Q04721 2471 aa12.01□□□□□ -0.49
PCDHA6-203ENST00000529310 TRBV12-3P01733 135 aa12□□□□□ -0.49
PCDHA6-203ENST00000529310 C10orf105Q8TEF2 133 aa12□□□□□ -0.49
PCDHA6-203ENST00000529310 Q8N7P7 452 aa12□□□□□ -0.49
PCDHA6-203ENST00000529310 PLXND1Q9Y4D7 1925 aa12□□□□□ -0.49
PCDHA6-203ENST00000529310 C11orf1Q9H5F2 150 aa12□□□□□ -0.49
PCDHA6-203ENST00000529310 KIF26AQ9ULI4 1882 aaPredicted RBP11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 ACACBO00763 2458 aa11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 MIAQ16674 131 aa11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 KLK12Q9UKR0 248 aa11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 IGKV2D-26A0A0A0MRZ7 120 aa11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 A0A1B0GXF2 115 aa11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 F8W735 103 aaPredicted RBP11.99□□□□□ -0.49
PCDHA6-203ENST00000529310 C2orf16Q68DN1 1984 aa11.98□□□□□ -0.49
PCDHA6-203ENST00000529310 A0A0J9YX75 114 aa11.98□□□□□ -0.49
PCDHA6-203ENST00000529310 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
PCDHA6-203ENST00000529310 ZFP36P26651 326 aaKnown RBP11.97□□□□□ -0.49
PCDHA6-203ENST00000529310 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
PCDHA6-203ENST00000529310 FBXL19-AS1Q494R0 122 aa11.97□□□□□ -0.49
PCDHA6-203ENST00000529310 COX7BP24311 80 aa11.97□□□□□ -0.49
PCDHA6-203ENST00000529310 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
PCDHA6-203ENST00000529310 Q6ZUT4 128 aa11.96□□□□□ -0.49
PCDHA6-203ENST00000529310 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.49
PCDHA6-203ENST00000529310 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 BRK1Q8WUW1 75 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 A0A0J9YXY3 114 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 DEFB135Q30KP9 77 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 SPATA25Q9BR10 227 aa11.96□□□□□ -0.5
PCDHA6-203ENST00000529310 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 Q8NA96 180 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 TM2D2Q9BX73 214 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 TRAV23DV6A0A075B6W5 121 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 DEFB4AO15263 64 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 SVIPQ8NHG7 77 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 ZNF80P51504 273 aaPredicted RBP11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
PCDHA6-203ENST00000529310 H0Y9J4 135 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 RNF183Q96D59 192 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 PRO0255Q9UI72 69 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 MYCNOSP40205 109 aa11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 TNRC6AQ8NDV7 1962 aaKnown RBP11.94□□□□□ -0.5
PCDHA6-203ENST00000529310 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
PCDHA6-203ENST00000529310 NRGNQ92686 78 aa11.93□□□□□ -0.5
PCDHA6-203ENST00000529310 NDUFV3P56181 108 aaKnown RBP11.93□□□□□ -0.5
PCDHA6-203ENST00000529310 P0C879 139 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 BPY2O14599 106 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 CUL9Q8IWT3 2517 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 GDF5OSQ5U4N7 250 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 C4orf48Q5BLP8 95 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 MT-ATP8P03928 68 aa11.92□□□□□ -0.5
PCDHA6-203ENST00000529310 TNCP24821 2201 aa11.91□□□□□ -0.5
PCDHA6-203ENST00000529310 TEX49A0A1B0GTD5 131 aa11.91□□□□□ -0.5
PCDHA6-203ENST00000529310 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
PCDHA6-203ENST00000529310 SEC61GP60059 68 aa11.9□□□□□ -0.5
PCDHA6-203ENST00000529310 P0DMU3 169 aa11.9□□□□□ -0.51
PCDHA6-203ENST00000529310 FAM231AP0DMU4 169 aa11.9□□□□□ -0.51
PCDHA6-203ENST00000529310 FAM231CP0DMU5 169 aa11.9□□□□□ -0.51
PCDHA6-203ENST00000529310 C20orf197Q8N268 126 aa11.9□□□□□ -0.51
PCDHA6-203ENST00000529310 MAP6D1Q9H9H5 199 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 UQCRQO14949 82 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 MSMPQ1L6U9 139 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 UFSP1Q6NVU6 142 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 ZFAND2AQ8N6M9 145 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
PCDHA6-203ENST00000529310 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
PCDHA6-203ENST00000529310 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
PCDHA6-203ENST00000529310 A6NDX4 124 aa11.88□□□□□ -0.51
PCDHA6-203ENST00000529310 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
PCDHA6-203ENST00000529310 SPANXB1Q9NS25 103 aaPredicted RBP11.88□□□□□ -0.51
PCDHA6-203ENST00000529310 ADAMTS9Q9P2N4 1935 aa11.87□□□□□ -0.51
PCDHA6-203ENST00000529310 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms