RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 PRO0255Q9UI72 69 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 TRBV6-4A0A1B0GX49 114 aa7.46□□□□□ -1.22
NEDD8-204ENST00000526430 CIDEAO60543 219 aa7.46□□□□□ -1.22
NEDD8-204ENST00000526430 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
NEDD8-204ENST00000526430 TPPP3Q9BW30 176 aa7.46□□□□□ -1.22
NEDD8-204ENST00000526430 TRGV4A0A0C4DH28 118 aa7.45□□□□□ -1.22
NEDD8-204ENST00000526430 PAX4O43316 350 aa7.45□□□□□ -1.22
NEDD8-204ENST00000526430 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
NEDD8-204ENST00000526430 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
NEDD8-204ENST00000526430 K7EQD1 137 aa7.44□□□□□ -1.22
NEDD8-204ENST00000526430 SLAQ13239 276 aa7.44□□□□□ -1.22
NEDD8-204ENST00000526430 ESRGQ1W209 222 aa7.44□□□□□ -1.22
NEDD8-204ENST00000526430 RNF185Q96GF1 192 aa7.44□□□□□ -1.22
NEDD8-204ENST00000526430 RNF213Q63HN8 5207 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 A0A1B0GUT8 65 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 A0A1B0GXF2 115 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 C7orf77A4D0Y5 90 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 GAS8-AS1O95177 125 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 SMR3BP02814 79 aaPredicted RBP7.43□□□□□ -1.22
NEDD8-204ENST00000526430 MT-ND4LP03901 98 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 GYPEP15421 78 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 TWIST1Q15672 202 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 CLRN3Q8NCR9 226 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 ANAPC16Q96DE5 110 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 KRTAP1-5Q9BYS1 174 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
NEDD8-204ENST00000526430 M0QY20 66 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 RHODO00212 210 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 PPP1R2P9O14990 202 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 NUDT3O95989 172 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 CCL18P55774 89 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 RAB4BP61018 213 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 ATRAIDQ6UW56 229 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 GATD1Q8NB37 220 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 LINC00588Q9Y4M8 146 aa7.42□□□□□ -1.22
NEDD8-204ENST00000526430 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 LYPD5Q6UWN5 251 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 AP1S3Q96PC3 154 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 CTDSP1Q9GZU7 261 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 TMEM191AQ9H0A3 160 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 DPH3P1Q9H4G8 78 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
NEDD8-204ENST00000526430 A0A087WWC5 75 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 APOC3P02656 99 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 TRGC1P0CF51 173 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 RAB4AP20338 218 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 KRTAP10-1P60331 282 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 RHOHQ15669 191 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
NEDD8-204ENST00000526430 IMMP2LQ96T52 175 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 Q9H8V8 135 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 ICOSQ9Y6W8 199 aa7.4□□□□□ -1.22
NEDD8-204ENST00000526430 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.22
NEDD8-204ENST00000526430 TRAV26-2A0A0B4J265 109 aa7.39□□□□□ -1.23
NEDD8-204ENST00000526430 UBE2D3P61077 147 aa7.39□□□□□ -1.23
NEDD8-204ENST00000526430 UBE2D2P62837 147 aa7.39□□□□□ -1.23
NEDD8-204ENST00000526430 RIGQ13278 110 aa7.39□□□□□ -1.23
NEDD8-204ENST00000526430 MRPL54Q6P161 138 aaKnown RBP7.39□□□□□ -1.23
NEDD8-204ENST00000526430 AMN1Q8IY45 258 aa7.39□□□□□ -1.23
NEDD8-204ENST00000526430 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 F5H697 171 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 EREGO14944 169 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 GAGE1Q13065 139 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 GAGE4Q13068 117 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 GAGE5Q13069 117 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 RHEBQ15382 184 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 ZNF56Q15929 161 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 NDUFA5Q16718 116 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 FAM104BQ5XKR9 115 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-204ENST00000526430 NEGR1Q7Z3B1 354 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 YPEL4Q96NS1 127 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
NEDD8-204ENST00000526430 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 MGPP08493 103 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
NEDD8-204ENST00000526430 CAMPP49913 170 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 TIRAPP58753 221 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 DEFB104AQ8WTQ1 72 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 RPL39LQ96EH5 51 aaKnown RBP7.37□□□□□ -1.23
NEDD8-204ENST00000526430 RPS10P5Q9NQ39 176 aa7.37□□□□□ -1.23
NEDD8-204ENST00000526430 A0A1B0GW15 77 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 SMIM17P0DL12 118 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 SRIP30626 198 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 FUSP35637 526 aaKnown RBP eCLIP7.36□□□□□ -1.23
NEDD8-204ENST00000526430 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
NEDD8-204ENST00000526430 RASL11AQ6T310 242 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 SVBPQ8N300 66 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 ATP6V0E2Q8NHE4 81 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
NEDD8-204ENST00000526430 MRPS16Q9Y3D3 137 aaKnown RBP7.36□□□□□ -1.23
NEDD8-204ENST00000526430 SMKR1H3BMG3 65 aa7.35□□□□□ -1.23
NEDD8-204ENST00000526430 SNAPINO95295 136 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms