RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 UMAD1C9J7I0 102 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 ELOBQ15370 118 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 FAM167A-AS1Q96KT0 104 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 LIMD2Q9BT23 127 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 TUBGCP6Q96RT7 1819 aa3.67□□□□□ -1.82
CHD1-208ENST00000512392 CDC42BPBQ9Y5S2 1711 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 PTPN23Q9H3S7 1636 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 CLTCQ00610 1675 aaKnown RBP3.66□□□□□ -1.82
CHD1-208ENST00000512392 TRBV7-3A0A075B6L6 115 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 A0A087WXM4 84 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 C10orf142B7Z368 130 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 UBE2D1P51668 147 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 HIGD2AQ9BW72 106 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 SCRT1Q9BWW7 348 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 C22orf24Q9Y442 160 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 DIP2CQ9Y2E4 1556 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 TOP2BQ02880 1626 aa3.66□□□□□ -1.82
CHD1-208ENST00000512392 KDM3BQ7LBC6 1761 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 CHKB-CPT1BH3BT56 60 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 SFTA3P0C7M3 94 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 EDDM3BP56851 147 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 ZNF56Q15929 161 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 C2orf82Q6UX34 121 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 ABCC8Q09428 1581 aa3.65□□□□□ -1.82
CHD1-208ENST00000512392 ARHGAP32A7KAX9 2087 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 ABCC1P33527 1531 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 HMGXB3Q12766 1538 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 NEXMIFQ5QGS0 1516 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 TANC1Q9C0D5 1861 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 TMEM30CPA0ZSE6 113 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 LINC00643Q86TS7 51 aa3.65□□□□□ -1.83
CHD1-208ENST00000512392 TOP2AP11388 1531 aaKnown RBP3.64□□□□□ -1.83
CHD1-208ENST00000512392 EXPH5Q8NEV8 1989 aa3.64□□□□□ -1.83
CHD1-208ENST00000512392 KIF1AQ12756 1690 aa3.64□□□□□ -1.83
CHD1-208ENST00000512392 A0A1W2PNU3 283 aaPredicted RBP3.64□□□□□ -1.83
CHD1-208ENST00000512392 CLPSL1A2RUU4 121 aa3.64□□□□□ -1.83
CHD1-208ENST00000512392 FREM3P0C091 2139 aa3.64□□□□□ -1.83
CHD1-208ENST00000512392 SMIM13P0DJ93 91 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 PDE6HQ13956 83 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 CASP8AP2Q9UKL3 1982 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 NUMA1Q14980 2115 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 RTL8CO15255 209 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 PSCAO43653 123 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 Q9BRP9 147 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 PLA2R1Q13018 1463 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 KCPQ6ZWJ8 1503 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 RAPGEF6Q8TEU7 1601 aa3.63□□□□□ -1.83
CHD1-208ENST00000512392 COL5A3P25940 1745 aaPredicted RBP3.63□□□□□ -1.83
CHD1-208ENST00000512392 STRCP1A6NGW2 1772 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 MDKP21741 143 aaPredicted RBP3.62□□□□□ -1.83
CHD1-208ENST00000512392 CNBPP62633 177 aaKnown RBP3.62□□□□□ -1.83
CHD1-208ENST00000512392 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 HEATR5BQ9P2D3 2071 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 CTSGP08311 255 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 HRES1P13985 223 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 LYPD1Q8N2G4 141 aa3.62□□□□□ -1.83
CHD1-208ENST00000512392 LAMB4A4D0S4 1761 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 ABCA9Q8IUA7 1624 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 ACYP1P07311 99 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 ZNF818PQ6ZRF7 136 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 COL11A1P12107 1806 aaPredicted RBP3.61□□□□□ -1.83
CHD1-208ENST00000512392 ITSN1Q15811 1721 aa3.61□□□□□ -1.83
CHD1-208ENST00000512392 RGPD2P0DJD1 1756 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 TRBV25-1A0A075B6N4 114 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 IQCF6A8MYZ5 107 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 F8WEM9 126 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 PROK2Q9HC23 129 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 CDC42SE2Q9NRR3 84 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 PLXNA1Q9UIW2 1896 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 ARFGEF2Q9Y6D5 1785 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 TRAV23DV6A0A075B6W5 121 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 MRGPRG-AS1Q2M3A8 158 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 PSORS1C2Q9UIG4 136 aa3.6□□□□□ -1.83
CHD1-208ENST00000512392 FAM223BA6NKX1 122 aa3.59□□□□□ -1.83
CHD1-208ENST00000512392 NDUFA4L2Q9NRX3 87 aa3.59□□□□□ -1.83
CHD1-208ENST00000512392 PRR34Q9NV39 138 aa3.59□□□□□ -1.83
CHD1-208ENST00000512392 CACNA1DQ01668 2161 aa3.59□□□□□ -1.84
CHD1-208ENST00000512392 ZFHX2Q9C0A1 2572 aaPredicted RBP3.59□□□□□ -1.84
CHD1-208ENST00000512392 ASXL1Q8IXJ9 1541 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 PYDC2Q56P42 97 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 Q6ZTI0 123 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 MRPL36Q9P0J6 103 aaKnown RBP3.58□□□□□ -1.84
CHD1-208ENST00000512392 IQSEC2Q5JU85 1478 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 MPDZO75970 2070 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 MICAL3Q7RTP6 2002 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 MAP2P11137 1827 aaKnown RBP3.58□□□□□ -1.84
CHD1-208ENST00000512392 IGKV3-7A0A075B6H7 116 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 BCE1O60756 84 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 IGHV3-33P01772 117 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 PSENENQ9NZ42 101 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 CCL26Q9Y258 94 aa3.58□□□□□ -1.84
CHD1-208ENST00000512392 COL16A1Q07092 1604 aaPredicted RBP3.58□□□□□ -1.84
CHD1-208ENST00000512392 PRR14LQ5THK1 2151 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms