RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RHEBQ15382 184 aa12.12□□□□□ -0.47
MCF2L-226ENST00000486210 ATRAIDQ6UW56 229 aa12.12□□□□□ -0.47
MCF2L-226ENST00000486210 SLC25A29Q8N8R3 303 aa12.12□□□□□ -0.47
MCF2L-226ENST00000486210 FAT1Q14517 4588 aa12.12□□□□□ -0.47
MCF2L-226ENST00000486210 A0A087WWC5 75 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 SNAPINO95295 136 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 KRTAP10-2P60368 255 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 SLAQ13239 276 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 RIGQ13278 110 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
MCF2L-226ENST00000486210 Q9H8V8 135 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 Q9UF83 564 aa12.11□□□□□ -0.47
MCF2L-226ENST00000486210 MGPP08493 103 aa12.1□□□□□ -0.47
MCF2L-226ENST00000486210 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
MCF2L-226ENST00000486210 ZNF56Q15929 161 aa12.1□□□□□ -0.47
MCF2L-226ENST00000486210 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
MCF2L-226ENST00000486210 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 H3BNG1 76 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 IMMP2LQ96T52 175 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 KRTAP1-5Q9BYS1 174 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
MCF2L-226ENST00000486210 A0A096LPF7 62 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 F5H697 171 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 K7EQD1 137 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 GYPEP15421 78 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 CAMPP49913 170 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 RAB4BP61018 213 aa12.08□□□□□ -0.48
MCF2L-226ENST00000486210 RHOHQ15669 191 aa12.07□□□□□ -0.48
MCF2L-226ENST00000486210 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
MCF2L-226ENST00000486210 UPK3BQ9BT76 320 aa12.07□□□□□ -0.48
MCF2L-226ENST00000486210 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
MCF2L-226ENST00000486210 URGCP-MRPS24S4R325 110 aa12.07□□□□□ -0.48
MCF2L-226ENST00000486210 HBBP68871 147 aa12.06□□□□□ -0.48
MCF2L-226ENST00000486210 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
MCF2L-226ENST00000486210 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
MCF2L-226ENST00000486210 PRADC1Q9BSG0 188 aa12.06□□□□□ -0.48
MCF2L-226ENST00000486210 MRPS16Q9Y3D3 137 aaKnown RBP12.06□□□□□ -0.48
MCF2L-226ENST00000486210 TRAV26-2A0A0B4J265 109 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 GAGE12JA6NER3 117 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 GAGE1Q13065 139 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 GAGE4Q13068 117 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 GAGE5Q13069 117 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 GAGE13Q4V321 117 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 KCNIP4Q6PIL6 250 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 ATP5L2Q7Z4Y8 100 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 BTF3L4Q96K17 158 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 ICOSQ9Y6W8 199 aa12.05□□□□□ -0.48
MCF2L-226ENST00000486210 A0A1B0GW15 77 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 M0QY20 66 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 BTF3P20290 206 aaKnown RBP12.04□□□□□ -0.48
MCF2L-226ENST00000486210 RAB4AP20338 218 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 ESRGQ1W209 222 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
MCF2L-226ENST00000486210 MYCBP2O75592 4640 aa12.03□□□□□ -0.48
MCF2L-226ENST00000486210 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
MCF2L-226ENST00000486210 S100PP25815 95 aa12.03□□□□□ -0.48
MCF2L-226ENST00000486210 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
MCF2L-226ENST00000486210 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
MCF2L-226ENST00000486210 LINC00694P0DN24 101 aa12.02□□□□□ -0.49
MCF2L-226ENST00000486210 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.49
MCF2L-226ENST00000486210 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
MCF2L-226ENST00000486210 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.49
MCF2L-226ENST00000486210 TRAV9-1A0A075B6T8 112 aa12.01□□□□□ -0.49
MCF2L-226ENST00000486210 TRBV10-1A0A0K0K1A3 114 aa12.01□□□□□ -0.49
MCF2L-226ENST00000486210 INAFM2P0DMQ5 153 aa12.01□□□□□ -0.49
MCF2L-226ENST00000486210 SRIP30626 198 aa12.01□□□□□ -0.49
MCF2L-226ENST00000486210 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
MCF2L-226ENST00000486210 SMKR1H3BMG3 65 aa12□□□□□ -0.49
MCF2L-226ENST00000486210 S100A8P05109 93 aa12□□□□□ -0.49
MCF2L-226ENST00000486210 MRPL51Q4U2R6 128 aaKnown RBP12□□□□□ -0.49
MCF2L-226ENST00000486210 RASL11AQ6T310 242 aa12□□□□□ -0.49
MCF2L-226ENST00000486210 ELOBQ15370 118 aa11.99□□□□□ -0.49
MCF2L-226ENST00000486210 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
MCF2L-226ENST00000486210 CBLN2Q8IUK8 224 aa11.99□□□□□ -0.49
MCF2L-226ENST00000486210 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
MCF2L-226ENST00000486210 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
MCF2L-226ENST00000486210 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 H7C1H1 209 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 NCR2O95944 276 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 XGP55808 180 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 UBE2D3P61077 147 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 UBE2D2P62837 147 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
MCF2L-226ENST00000486210 LYPD5Q6UWN5 251 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 TMEM136Q6ZRR5 245 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 ATP6V0E2Q8NHE4 81 aa11.98□□□□□ -0.49
MCF2L-226ENST00000486210 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
MCF2L-226ENST00000486210 EREGO14944 169 aa11.97□□□□□ -0.49
MCF2L-226ENST00000486210 SIVA1O15304 175 aa11.97□□□□□ -0.49
MCF2L-226ENST00000486210 RPS10P46783 165 aaKnown RBP11.97□□□□□ -0.49
MCF2L-226ENST00000486210 MRAP2Q96G30 205 aa11.97□□□□□ -0.49
MCF2L-226ENST00000486210 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
MCF2L-226ENST00000486210 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
MCF2L-226ENST00000486210 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
MCF2L-226ENST00000486210 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.49
MCF2L-226ENST00000486210 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.49
MCF2L-226ENST00000486210 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms