RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CD7P09564 240 aa10.74□□□□□ -0.69
NELFCD-204ENST00000474543 ID1P41134 155 aa10.74□□□□□ -0.69
NELFCD-204ENST00000474543 UBE2D1P51668 147 aa10.74□□□□□ -0.69
NELFCD-204ENST00000474543 CFHR3Q02985 330 aa10.74□□□□□ -0.69
NELFCD-204ENST00000474543 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
NELFCD-204ENST00000474543 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
NELFCD-204ENST00000474543 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
NELFCD-204ENST00000474543 TSSC4Q9Y5U2 329 aaPredicted RBP10.74□□□□□ -0.69
NELFCD-204ENST00000474543 TMEM238LA0A1B0GVL6 79 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 A6NJY4 79 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 F5H697 171 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 J3QR89 54 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
NELFCD-204ENST00000474543 MRPL16Q9NX20 251 aaKnown RBP10.73□□□□□ -0.69
NELFCD-204ENST00000474543 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
NELFCD-204ENST00000474543 LGALS9O00182 355 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 AZU1P20160 251 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 HERVK_113P61574 105 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 TIMM17AQ99595 171 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 SIGMAR1Q99720 223 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
NELFCD-204ENST00000474543 SETD2Q9BYW2 2564 aaPredicted RBP10.71□□□□□ -0.69
NELFCD-204ENST00000474543 A0A0J9YY99 117 aa10.71□□□□□ -0.69
NELFCD-204ENST00000474543 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
NELFCD-204ENST00000474543 ANK3Q12955 4377 aaKnown RBP10.7□□□□□ -0.7
NELFCD-204ENST00000474543 TRBV6-5A0A0K0K1A5 114 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 INAFM1C9JVW0 142 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 TSPAN13O95857 204 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 C9orf85Q96MD7 179 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 FN1P02751 2386 aaKnown RBP10.7□□□□□ -0.7
NELFCD-204ENST00000474543 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 GATA3P23771 443 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 INSL3P51460 131 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 TMEM95Q3KNT9 176 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 ZNF876PQ49A33 203 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 SPATA25Q9BR10 227 aa10.7□□□□□ -0.7
NELFCD-204ENST00000474543 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
NELFCD-204ENST00000474543 DLX4Q92988 240 aaPredicted RBP10.69□□□□□ -0.7
NELFCD-204ENST00000474543 MDFICQ9P1T7 246 aa10.69□□□□□ -0.7
NELFCD-204ENST00000474543 J3QLI3 93 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 APOMO95445 188 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
NELFCD-204ENST00000474543 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 TRAV12-2A0A075B6T6 113 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 AVPP01185 164 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 PSMB8P28062 276 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 UBE2D3P61077 147 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 UBE2D2P62837 147 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 SFTA2Q6UW10 78 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 NDUFA11Q86Y39 141 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
NELFCD-204ENST00000474543 ZNF256Q9Y2P7 627 aaPredicted RBP10.68□□□□□ -0.7
NELFCD-204ENST00000474543 LOC107984156A0A0G2JMH3 177 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 A0A0J9YX75 114 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 M0QY20 66 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 IGKV3-20P01619 116 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 IGHV3-30P01768 117 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 IGHV3-30-5P0DP03 117 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 ARL17AQ8IVW1 177 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 AMELXQ99217 191 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 SCGB1A1P11684 91 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 PSMB2P49721 201 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 ZNF56Q15929 161 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 Q8N1Y9 231 aa10.67□□□□□ -0.7
NELFCD-204ENST00000474543 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
NELFCD-204ENST00000474543 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
NELFCD-204ENST00000474543 ZNF580Q9UK33 172 aa10.66□□□□□ -0.7
NELFCD-204ENST00000474543 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
NELFCD-204ENST00000474543 CFC1P0CG37 223 aa10.65□□□□□ -0.7
NELFCD-204ENST00000474543 NSUN5P1Q3KNT7 163 aa10.65□□□□□ -0.7
NELFCD-204ENST00000474543 C10orf99Q6UWK7 81 aa10.65□□□□□ -0.7
NELFCD-204ENST00000474543 J3QQQ9 107 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 K7EQG2 157 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 CRLF1O75462 422 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 P0DMU3 169 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 FAM231AP0DMU4 169 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 FAM231CP0DMU5 169 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 FOXI1Q12951 378 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 NFE4Q86UQ8 179 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 C1QTNF4Q9BXJ3 329 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.71
NELFCD-204ENST00000474543 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 SNRPD3P62318 126 aaKnown RBP10.64□□□□□ -0.71
NELFCD-204ENST00000474543 RHOHQ15669 191 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 TRPT1Q86TN4 253 aaKnown RBP10.64□□□□□ -0.71
NELFCD-204ENST00000474543 TEX29Q8N6K0 151 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 SORL1Q92673 2214 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 JMJD1CQ15652 2540 aa10.64□□□□□ -0.71
NELFCD-204ENST00000474543 SPINK13Q1W4C9 94 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms