RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 SIVA1O15304 175 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 GVINP1Q7Z2Y8 2422 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 LYPD6Q86Y78 171 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 C10orf105Q8TEF2 133 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 TMEM190Q8WZ59 177 aa11.76□□□□□ -0.53
FNDC1-201ENST00000297267 COL4A4P53420 1690 aaPredicted RBP11.75□□□□□ -0.53
FNDC1-201ENST00000297267 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
FNDC1-201ENST00000297267 SPATA12Q7Z6I5 190 aa11.75□□□□□ -0.53
FNDC1-201ENST00000297267 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 TRBV7-3A0A075B6L6 115 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 Q8NA96 180 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 C9orf66Q5T8R8 295 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 NCOR1P1Q9H4R4 102 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 TCL1BO95988 128 aa11.74□□□□□ -0.53
FNDC1-201ENST00000297267 ODF1Q14990 250 aa11.73□□□□□ -0.53
FNDC1-201ENST00000297267 PLCE1Q9P212 2302 aa11.73□□□□□ -0.53
FNDC1-201ENST00000297267 EDN2P20800 178 aa11.73□□□□□ -0.53
FNDC1-201ENST00000297267 Q6ZTI0 123 aa11.73□□□□□ -0.53
FNDC1-201ENST00000297267 WFDC10AQ9H1F0 79 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 LINC00269Q8N2A0 174 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 TRAV23DV6A0A075B6W5 121 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 UBE2AP49459 152 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 FANCD2OSQ96PS1 177 aa11.72□□□□□ -0.53
FNDC1-201ENST00000297267 Q8NFD4 153 aa11.71□□□□□ -0.53
FNDC1-201ENST00000297267 RNF138Q8WVD3 245 aa11.71□□□□□ -0.53
FNDC1-201ENST00000297267 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.54
FNDC1-201ENST00000297267 MPLKIPQ8TAP9 179 aa11.71□□□□□ -0.54
FNDC1-201ENST00000297267 TMEM263Q8WUH6 116 aaKnown RBP11.7□□□□□ -0.54
FNDC1-201ENST00000297267 MAP6D1Q9H9H5 199 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 MLST8Q9BVC4 326 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 TM2D2Q9BX73 214 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
FNDC1-201ENST00000297267 SDIM1Q6ZPB5 146 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 DAZ4Q86SG3 579 aaKnown RBP11.7□□□□□ -0.54
FNDC1-201ENST00000297267 DAZ3Q9NR90 486 aaKnown RBP11.7□□□□□ -0.54
FNDC1-201ENST00000297267 SPART-AS1P0CW21 52 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 PIK3CD-AS1Q5SR53 167 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
FNDC1-201ENST00000297267 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 IGLV2-8P01709 118 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 ACYP1P07311 99 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 IGFL2Q6UWQ7 119 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 H0Y9J4 135 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 Q6ZS46 218 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 C4orf3Q8WVX3 66 aa11.69□□□□□ -0.54
FNDC1-201ENST00000297267 MALRD1Q5VYJ5 2156 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 CHKB-CPT1BH3BT56 60 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 H3BUA1 57 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 FOXI1Q12951 378 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 MAPKAPK5-AS1Q8N8E1 139 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 LOC100131303A0A0U1RQF7 123 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 GAS8-AS1O95177 125 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 ABCA1O95477 2261 aa11.68□□□□□ -0.54
FNDC1-201ENST00000297267 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.67□□□□□ -0.54
FNDC1-201ENST00000297267 PSMB8P28062 276 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 SMAD5-AS1Q9Y6J3 95 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 ACACAQ13085 2346 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 A0A0B4J2C4 111 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 CRIP1P50238 77 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 RMI2Q96E14 147 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 CRYGBP07316 175 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
FNDC1-201ENST00000297267 SPAG11BQ08648 103 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 INAFM1C9JVW0 142 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 CCL18P55774 89 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 HERV-K104P63124 156 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 M0R2N4 97 aa11.66□□□□□ -0.54
FNDC1-201ENST00000297267 MT-ATP8P03928 68 aa11.65□□□□□ -0.54
FNDC1-201ENST00000297267 G3V4G9 280 aa11.65□□□□□ -0.54
FNDC1-201ENST00000297267 NREPQ16612 68 aa11.65□□□□□ -0.54
FNDC1-201ENST00000297267 PCNTO95613 3336 aa11.65□□□□□ -0.54
FNDC1-201ENST00000297267 HCFC1P51610 2035 aa11.65□□□□□ -0.54
FNDC1-201ENST00000297267 C19orf71A6NCJ1 209 aa11.64□□□□□ -0.55
FNDC1-201ENST00000297267 E9PLD3 99 aa11.64□□□□□ -0.55
FNDC1-201ENST00000297267 IGLV2-18A0A075B6J9 118 aa11.63□□□□□ -0.55
FNDC1-201ENST00000297267 TRBV6-1A0A0K0K1D8 114 aa11.63□□□□□ -0.55
FNDC1-201ENST00000297267 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
FNDC1-201ENST00000297267 CTRLP40313 264 aa11.62□□□□□ -0.55
FNDC1-201ENST00000297267 ABCA4P78363 2273 aa11.62□□□□□ -0.55
FNDC1-201ENST00000297267 RAI1Q7Z5J4 1906 aaPredicted RBP11.62□□□□□ -0.55
FNDC1-201ENST00000297267 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 A0A0J9YX75 114 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 A6NDX4 124 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 FAM19A5Q7Z5A7 132 aaPredicted RBP11.61□□□□□ -0.55
FNDC1-201ENST00000297267 XAGE1AQ9HD64 81 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 A0A0J9YXY3 114 aa11.61□□□□□ -0.55
FNDC1-201ENST00000297267 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
FNDC1-201ENST00000297267 NDUFA1O15239 70 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms