RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 LGALS9O00182 355 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 MSMBP08118 114 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 PAPPA-AS1Q5QFB9 102 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 SH2D6Q7Z4S9 175 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 MTURNQ8N3F0 131 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
CTSD-201ENST00000236671 TRBV6-5A0A0K0K1A5 114 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 TRBV27A0A0K0K1C4 114 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 F5H697 171 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 A6NJY4 79 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 HERVK_113P61574 105 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 MRPL16Q9NX20 251 aaKnown RBP11.54□□□□□ -0.56
CTSD-201ENST00000236671 ZNF580Q9UK33 172 aa11.54□□□□□ -0.56
CTSD-201ENST00000236671 AVPP01185 164 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 PSMB8P28062 276 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTSD-201ENST00000236671 ODF3Q96PU9 254 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 A0A0J9YY99 117 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 ZNF688P0C7X2 276 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 TSPEAR-AS2P59090 65 aa11.53□□□□□ -0.56
CTSD-201ENST00000236671 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
CTSD-201ENST00000236671 FN1P02751 2386 aaKnown RBP11.52□□□□□ -0.56
CTSD-201ENST00000236671 HIVEP2P31629 2446 aa11.52□□□□□ -0.57
CTSD-201ENST00000236671 ZNF876PQ49A33 203 aa11.52□□□□□ -0.57
CTSD-201ENST00000236671 FAM74A4Q5TZK3 123 aa11.52□□□□□ -0.57
CTSD-201ENST00000236671 ZNRF2Q8NHG8 242 aa11.52□□□□□ -0.57
CTSD-201ENST00000236671 SPAG8Q99932 426 aaPredicted RBP11.52□□□□□ -0.57
CTSD-201ENST00000236671 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
CTSD-201ENST00000236671 A0A0J9YX75 114 aa11.51□□□□□ -0.57
CTSD-201ENST00000236671 J3QR89 54 aa11.51□□□□□ -0.57
CTSD-201ENST00000236671 TSPAN13O95857 204 aa11.51□□□□□ -0.57
CTSD-201ENST00000236671 TRAV12-2A0A075B6T6 113 aa11.51□□□□□ -0.57
CTSD-201ENST00000236671 M0QY20 66 aa11.51□□□□□ -0.57
CTSD-201ENST00000236671 GAGE12HA6NDE8 117 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 DSCR9P59020 149 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 AMELXQ99217 191 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 IGKV3-20P01619 116 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 ZNF56Q15929 161 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 Q8N1Y9 231 aa11.5□□□□□ -0.57
CTSD-201ENST00000236671 ZNF256Q9Y2P7 627 aaPredicted RBP11.5□□□□□ -0.57
CTSD-201ENST00000236671 JMJD1CQ15652 2540 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 IGHV4-31P0DP07 118 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 AZU1P20160 251 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 UBE2D3P61077 147 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 UBE2D2P62837 147 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 SYT8Q8NBV8 401 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 DLX4Q92988 240 aaPredicted RBP11.49□□□□□ -0.57
CTSD-201ENST00000236671 SPATA25Q9BR10 227 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 GTSF1LQ9H1H1 148 aa11.49□□□□□ -0.57
CTSD-201ENST00000236671 K7EQG2 157 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 INSL3P51460 131 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 IGHV1OR15-1A0A075B7D0 117 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 IGHV3-30P01768 117 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 IGHV3-30-5P0DP03 117 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 SMCPP49901 116 aaPredicted RBP11.48□□□□□ -0.57
CTSD-201ENST00000236671 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
CTSD-201ENST00000236671 RHOHQ15669 191 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 NFE4Q86UQ8 179 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 SLC25A29Q8N8R3 303 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 SIGMAR1Q99720 223 aa11.48□□□□□ -0.57
CTSD-201ENST00000236671 B4DSR2 109 aa11.47□□□□□ -0.57
CTSD-201ENST00000236671 APOMO95445 188 aa11.47□□□□□ -0.57
CTSD-201ENST00000236671 TGFAP01135 160 aa11.47□□□□□ -0.57
CTSD-201ENST00000236671 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
CTSD-201ENST00000236671 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
CTSD-201ENST00000236671 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
CTSD-201ENST00000236671 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
CTSD-201ENST00000236671 J3QQQ9 107 aa11.46□□□□□ -0.57
CTSD-201ENST00000236671 P0DMU3 169 aa11.46□□□□□ -0.57
CTSD-201ENST00000236671 FAM231AP0DMU4 169 aa11.46□□□□□ -0.57
CTSD-201ENST00000236671 FAM231CP0DMU5 169 aa11.46□□□□□ -0.57
CTSD-201ENST00000236671 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.57
CTSD-201ENST00000236671 LOC107984156A0A0G2JMH3 177 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 TMEM89A2RUT3 159 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 PSMB2P49721 201 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 ARL17AQ8IVW1 177 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 CFC1BP0CG36 223 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 CFC1P0CG37 223 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 SCGB1A1P11684 91 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 ATP6V0E2Q8NHE4 81 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 C1QTNF4Q9BXJ3 329 aa11.45□□□□□ -0.58
CTSD-201ENST00000236671 LY6G6DO95868 133 aa11.44□□□□□ -0.58
CTSD-201ENST00000236671 SMAGPQ0VAQ4 97 aa11.44□□□□□ -0.58
CTSD-201ENST00000236671 C20orf203Q8NBC4 194 aa11.44□□□□□ -0.58
CTSD-201ENST00000236671 TMEM223A0PJW6 202 aa11.44□□□□□ -0.58
CTSD-201ENST00000236671 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
CTSD-201ENST00000236671 GATA3P23771 443 aa11.44□□□□□ -0.58
CTSD-201ENST00000236671 SYNJ2BPP57105 145 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms