RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 CIDEAO60543 219 aa10.47□□□□□ -0.73
RPA3-201ENST00000223129 NUDT3O95989 172 aa10.47□□□□□ -0.73
RPA3-201ENST00000223129 EVI2AP22794 236 aa10.47□□□□□ -0.73
RPA3-201ENST00000223129 SLAQ13239 276 aa10.47□□□□□ -0.73
RPA3-201ENST00000223129 SLC25A29Q8N8R3 303 aa10.47□□□□□ -0.73
RPA3-201ENST00000223129 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.73
RPA3-201ENST00000223129 AP1S3Q96PC3 154 aa10.46□□□□□ -0.73
RPA3-201ENST00000223129 KIF25-AS1Q9Y6Z4 181 aa10.46□□□□□ -0.73
RPA3-201ENST00000223129 LOC100131303A0A0U1RQF7 123 aa10.46□□□□□ -0.74
RPA3-201ENST00000223129 A0A1B0GUT8 65 aa10.46□□□□□ -0.74
RPA3-201ENST00000223129 BORCS7Q96B45 105 aa10.46□□□□□ -0.74
RPA3-201ENST00000223129 RHODO00212 210 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 Q9UF83 564 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 TCTAP57738 103 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 LINC00315P59091 139 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
RPA3-201ENST00000223129 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
RPA3-201ENST00000223129 H3BNG1 76 aa10.44□□□□□ -0.74
RPA3-201ENST00000223129 GYPEP15421 78 aa10.44□□□□□ -0.74
RPA3-201ENST00000223129 ZNF56Q15929 161 aa10.44□□□□□ -0.74
RPA3-201ENST00000223129 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
RPA3-201ENST00000223129 A0A096LPF7 62 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 F5H697 171 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 MGPP08493 103 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 P0DMU3 169 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 IQCJQ1A5X6 159 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 C2orf88Q9BSF0 95 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 TRAV9-1A0A075B6T8 112 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 K7EQD1 137 aa10.43□□□□□ -0.74
RPA3-201ENST00000223129 A0A1B0GV90 55 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 RAB4BP61018 213 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 RIGQ13278 110 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 RHOHQ15669 191 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 MRPL54Q6P161 138 aaKnown RBP10.42□□□□□ -0.74
RPA3-201ENST00000223129 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 DPH3P1Q9H4G8 78 aa10.42□□□□□ -0.74
RPA3-201ENST00000223129 ICOSQ9Y6W8 199 aa10.41□□□□□ -0.74
RPA3-201ENST00000223129 CAMPP49913 170 aa10.41□□□□□ -0.74
RPA3-201ENST00000223129 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
RPA3-201ENST00000223129 MRPL23Q16540 153 aaKnown RBP10.4□□□□□ -0.74
RPA3-201ENST00000223129 GAGE12JA6NER3 117 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 GAGE1Q13065 139 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 GAGE4Q13068 117 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 GAGE5Q13069 117 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 GAGE13Q4V321 117 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.75
RPA3-201ENST00000223129 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
RPA3-201ENST00000223129 SRIP30626 198 aa10.39□□□□□ -0.75
RPA3-201ENST00000223129 TMEM191AQ9H0A3 160 aa10.39□□□□□ -0.75
RPA3-201ENST00000223129 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 ESRGQ1W209 222 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 SACSQ9NZJ4 4579 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 M0QY20 66 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 LY6G6CO95867 125 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 NEGR1Q7Z3B1 354 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 AMN1Q8IY45 258 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 ZNRF2Q8NHG8 242 aa10.38□□□□□ -0.75
RPA3-201ENST00000223129 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 ALMS1Q8TCU4 4167 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 HBBP68871 147 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 LINC00476Q8WZB0 136 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 RNF185Q96GF1 192 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 DNAH1Q9P2D7 4330 aa10.37□□□□□ -0.75
RPA3-201ENST00000223129 ESDP10768 282 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 RAB4AP20338 218 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 GATD1Q8NB37 220 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 TRBV10-1A0A0K0K1A3 114 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 A0A1B0GW15 77 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 LYPD5Q6UWN5 251 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
RPA3-201ENST00000223129 HYDINQ4G0P3 5121 aa10.35□□□□□ -0.75
RPA3-201ENST00000223129 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
RPA3-201ENST00000223129 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
RPA3-201ENST00000223129 CCL18P55774 89 aa10.35□□□□□ -0.75
RPA3-201ENST00000223129 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
RPA3-201ENST00000223129 MRPL18Q9H0U6 180 aaKnown RBP10.35□□□□□ -0.75
RPA3-201ENST00000223129 TRBV7-3A0A075B6L6 115 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 NUPR1O60356 82 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
RPA3-201ENST00000223129 RASL11AQ6T310 242 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 ATP6V0E2Q8NHE4 81 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
RPA3-201ENST00000223129 H7C1H1 209 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 FAM104BQ5XKR9 115 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 KMT2AQ03164 3969 aa10.34□□□□□ -0.75
RPA3-201ENST00000223129 LCE6AA0A183 80 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 Q0VG73 95 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 COX19Q49B96 90 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
RPA3-201ENST00000223129 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
RPA3-201ENST00000223129 SMKR1H3BMG3 65 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms