RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 HTN3P15516 51 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 HOXA5P20719 270 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 ELOBQ15370 118 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 WDR73Q6P4I2 378 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 YPEL4Q96NS1 127 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
CCNA1-203ENST00000625767 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.53
CCNA1-203ENST00000625767 Q6ZSN1 163 aa11.71□□□□□ -0.53
CCNA1-203ENST00000625767 OR4C5Q8NGB2 326 aa11.71□□□□□ -0.53
CCNA1-203ENST00000625767 BORCS7Q96B45 105 aa11.71□□□□□ -0.53
CCNA1-203ENST00000625767 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 S100PP25815 95 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 RIGQ13278 110 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 PIK3CD-AS1Q5SR53 167 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 BTF3L4Q96K17 158 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 AP1S3Q96PC3 154 aa11.71□□□□□ -0.54
CCNA1-203ENST00000625767 PLECQ15149 4684 aaKnown RBP11.7□□□□□ -0.54
CCNA1-203ENST00000625767 TEX48A0A1B0GUV7 120 aa11.7□□□□□ -0.54
CCNA1-203ENST00000625767 A8MWV9 139 aa11.7□□□□□ -0.54
CCNA1-203ENST00000625767 LINC00315P59091 139 aa11.7□□□□□ -0.54
CCNA1-203ENST00000625767 C18orf15Q96N68 181 aa11.7□□□□□ -0.54
CCNA1-203ENST00000625767 HBBP68871 147 aa11.69□□□□□ -0.54
CCNA1-203ENST00000625767 FHL2Q14192 279 aa11.69□□□□□ -0.54
CCNA1-203ENST00000625767 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
CCNA1-203ENST00000625767 ATP5G1P05496 136 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 MGPP08493 103 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 Q9UF83 564 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 TRGC1P0CF51 173 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 AMN1Q8IY45 258 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
CCNA1-203ENST00000625767 TRAV26-2A0A0B4J265 109 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 F5H768 121 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 P0DMU3 169 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 TENM2Q9NT68 2774 aa11.67□□□□□ -0.54
CCNA1-203ENST00000625767 ZNF56Q15929 161 aa11.66□□□□□ -0.54
CCNA1-203ENST00000625767 RNF185Q96GF1 192 aa11.66□□□□□ -0.54
CCNA1-203ENST00000625767 TMEM191AQ9H0A3 160 aa11.66□□□□□ -0.54
CCNA1-203ENST00000625767 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
CCNA1-203ENST00000625767 TRAV9-1A0A075B6T8 112 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 TRGV4A0A0C4DH28 118 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 RAB4BP61018 213 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 TMEM136Q6ZRR5 245 aa11.65□□□□□ -0.54
CCNA1-203ENST00000625767 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.55
CCNA1-203ENST00000625767 A0A0J9YY99 117 aa11.65□□□□□ -0.55
CCNA1-203ENST00000625767 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.55
CCNA1-203ENST00000625767 GATA1P15976 413 aaPredicted RBP11.65□□□□□ -0.55
CCNA1-203ENST00000625767 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.55
CCNA1-203ENST00000625767 GATD1Q8NB37 220 aa11.65□□□□□ -0.55
CCNA1-203ENST00000625767 PHLDA1Q8WV24 401 aaPredicted RBP11.65□□□□□ -0.55
CCNA1-203ENST00000625767 F5H697 171 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 SMKR1H3BMG3 65 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 RAB4AP20338 218 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 SLC25A29Q8N8R3 303 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 FAM210BQ96KR6 192 aa11.64□□□□□ -0.55
CCNA1-203ENST00000625767 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 A0A1B0GW15 77 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 SLAQ13239 276 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 FAM104BQ5XKR9 115 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 SMIM15Q7Z3B0 74 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 VSIG2Q96IQ7 327 aa11.63□□□□□ -0.55
CCNA1-203ENST00000625767 TRAV10A0A0B4J240 114 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 COLCA2A8K830 154 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 RHODO00212 210 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 NCR2O95944 276 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 CRYBA4P53673 196 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 MRPL51Q4U2R6 128 aaKnown RBP11.62□□□□□ -0.55
CCNA1-203ENST00000625767 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
CCNA1-203ENST00000625767 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
CCNA1-203ENST00000625767 RASL11AQ6T310 242 aa11.61□□□□□ -0.55
CCNA1-203ENST00000625767 PRO0255Q9UI72 69 aa11.61□□□□□ -0.55
CCNA1-203ENST00000625767 K7EQD1 137 aa11.6□□□□□ -0.55
CCNA1-203ENST00000625767 M0QY20 66 aa11.6□□□□□ -0.55
CCNA1-203ENST00000625767 S100A8P05109 93 aa11.6□□□□□ -0.55
CCNA1-203ENST00000625767 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
CCNA1-203ENST00000625767 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
CCNA1-203ENST00000625767 RPL39LQ96EH5 51 aaKnown RBP11.6□□□□□ -0.55
CCNA1-203ENST00000625767 PAX4O43316 350 aa11.59□□□□□ -0.55
CCNA1-203ENST00000625767 WWC2-AS2Q96NR7 200 aa11.59□□□□□ -0.55
CCNA1-203ENST00000625767 GNB1LQ9BYB4 327 aa11.59□□□□□ -0.55
CCNA1-203ENST00000625767 TRBV6-4A0A1B0GX49 114 aa11.58□□□□□ -0.56
CCNA1-203ENST00000625767 IGLL5B9A064 214 aa11.58□□□□□ -0.56
CCNA1-203ENST00000625767 D6R8Y8 96 aa11.58□□□□□ -0.56
CCNA1-203ENST00000625767 CIDEAO60543 219 aa11.58□□□□□ -0.56
CCNA1-203ENST00000625767 GYPEP15421 78 aa11.58□□□□□ -0.56
CCNA1-203ENST00000625767 MRPL18Q9H0U6 180 aaKnown RBP11.58□□□□□ -0.56
CCNA1-203ENST00000625767 A0A096LPF7 62 aa11.57□□□□□ -0.56
CCNA1-203ENST00000625767 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
CCNA1-203ENST00000625767 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
CCNA1-203ENST00000625767 FRZBQ92765 325 aa11.57□□□□□ -0.56
CCNA1-203ENST00000625767 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
CCNA1-203ENST00000625767 APCSP02743 223 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms