RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 NISCHQ9Y2I1 1504 aa39.26■■■■□ 3.88
CCNA1-203ENST00000625767 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.13
CCNA1-203ENST00000625767 ABCC9O60706 1549 aa33.35■■■□□ 2.93
CCNA1-203ENST00000625767 ZCCHC6Q5VYS8 1495 aaKnown RBP32.85■■■□□ 2.85
CCNA1-203ENST00000625767 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
CCNA1-203ENST00000625767 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
CCNA1-203ENST00000625767 NACADO15069 1562 aa32.32■■■□□ 2.76
CCNA1-203ENST00000625767 MYO15BQ96JP2 1530 aa32.27■■■□□ 2.76
CCNA1-203ENST00000625767 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
CCNA1-203ENST00000625767 SCRIBQ14160 1630 aa31.75■■■□□ 2.67
CCNA1-203ENST00000625767 UNC13AQ9UPW8 1703 aa31.71■■■□□ 2.67
CCNA1-203ENST00000625767 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
CCNA1-203ENST00000625767 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
CCNA1-203ENST00000625767 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
CCNA1-203ENST00000625767 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
CCNA1-203ENST00000625767 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
CCNA1-203ENST00000625767 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
CCNA1-203ENST00000625767 MROH2BQ7Z745 1585 aa30.35■■■□□ 2.45
CCNA1-203ENST00000625767 BAZ1AQ9NRL2 1556 aaPredicted RBP30.35■■■□□ 2.45
CCNA1-203ENST00000625767 RSF1Q96T23 1441 aaPredicted RBP30.18■■■□□ 2.42
CCNA1-203ENST00000625767 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
CCNA1-203ENST00000625767 WIZO95785 1651 aa30.1■■■□□ 2.41
CCNA1-203ENST00000625767 DNAJC5BQ9UF47 199 aa30.07■■■□□ 2.41
CCNA1-203ENST00000625767 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
CCNA1-203ENST00000625767 PEG3Q9GZU2 1588 aa29.98■■■□□ 2.39
CCNA1-203ENST00000625767 SUPT5HO00267 1087 aaKnown RBP29.98■■■□□ 2.39
CCNA1-203ENST00000625767 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
CCNA1-203ENST00000625767 NCAPD3P42695 1498 aa29.83■■■□□ 2.37
CCNA1-203ENST00000625767 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
CCNA1-203ENST00000625767 HMGXB3Q12766 1538 aa29.75■■■□□ 2.35
CCNA1-203ENST00000625767 TOP2AP11388 1531 aaKnown RBP29.69■■■□□ 2.34
CCNA1-203ENST00000625767 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.29
CCNA1-203ENST00000625767 NESP48681 1621 aa29.09■■■□□ 2.25
CCNA1-203ENST00000625767 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
CCNA1-203ENST00000625767 CFTRP13569 1480 aa28.99■■■□□ 2.23
CCNA1-203ENST00000625767 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
CCNA1-203ENST00000625767 PRDM2Q13029 1718 aa28.89■■■□□ 2.22
CCNA1-203ENST00000625767 KIF21AQ7Z4S6 1674 aa28.77■■■□□ 2.2
CCNA1-203ENST00000625767 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
CCNA1-203ENST00000625767 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
CCNA1-203ENST00000625767 ABCC8Q09428 1581 aa28.61■■■□□ 2.17
CCNA1-203ENST00000625767 ERCC6Q03468 1493 aa28.61■■■□□ 2.17
CCNA1-203ENST00000625767 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
CCNA1-203ENST00000625767 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
CCNA1-203ENST00000625767 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
CCNA1-203ENST00000625767 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
CCNA1-203ENST00000625767 CUX1P39880 1505 aa28.42■■■□□ 2.14
CCNA1-203ENST00000625767 WRNQ14191 1432 aaPredicted RBP eCLIP28.41■■■□□ 2.14
CCNA1-203ENST00000625767 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
CCNA1-203ENST00000625767 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
CCNA1-203ENST00000625767 DNMBPQ6XZF7 1577 aa28.35■■■□□ 2.13
CCNA1-203ENST00000625767 WDR62O43379 1518 aa28.32■■■□□ 2.12
CCNA1-203ENST00000625767 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
CCNA1-203ENST00000625767 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
CCNA1-203ENST00000625767 BIVM-ERCC5R4GMW8 1640 aa28.3■■■□□ 2.12
CCNA1-203ENST00000625767 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
CCNA1-203ENST00000625767 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
CCNA1-203ENST00000625767 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
CCNA1-203ENST00000625767 CUX2O14529 1486 aa28.1■■■□□ 2.09
CCNA1-203ENST00000625767 RAD54L2Q9Y4B4 1467 aa28.09■■■□□ 2.09
CCNA1-203ENST00000625767 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
CCNA1-203ENST00000625767 SOGA1O94964 1423 aa28.02■■■□□ 2.08
CCNA1-203ENST00000625767 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
CCNA1-203ENST00000625767 IFT140Q96RY7 1462 aa27.93■■■□□ 2.06
CCNA1-203ENST00000625767 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
CCNA1-203ENST00000625767 ABCA10Q8WWZ4 1543 aa27.89■■■□□ 2.06
CCNA1-203ENST00000625767 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
CCNA1-203ENST00000625767 TDRD9Q8NDG6 1382 aaKnown RBP27.85■■■□□ 2.05
CCNA1-203ENST00000625767 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.04
CCNA1-203ENST00000625767 EIF4G3O43432 1585 aaKnown RBP27.79■■■□□ 2.04
CCNA1-203ENST00000625767 ABCA5Q8WWZ7 1642 aa27.79■■■□□ 2.04
CCNA1-203ENST00000625767 FAM9AQ8IZU1 332 aaPredicted RBP27.73■■■□□ 2.03
CCNA1-203ENST00000625767 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
CCNA1-203ENST00000625767 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
CCNA1-203ENST00000625767 PBRM1Q86U86 1689 aa27.7■■■□□ 2.02
CCNA1-203ENST00000625767 GRIN2BQ13224 1484 aa27.59■■■□□ 2.01
CCNA1-203ENST00000625767 IGF1RP08069 1367 aa27.58■■■□□ 2.01
CCNA1-203ENST00000625767 ERICH3Q5RHP9 1530 aa27.55■■■□□ 2
CCNA1-203ENST00000625767 EEA1Q15075 1411 aa27.55■■■□□ 2
CCNA1-203ENST00000625767 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
CCNA1-203ENST00000625767 CSRNP3Q8WYN3 585 aa27.51■■□□□ 1.99
CCNA1-203ENST00000625767 ADAMTS12P58397 1594 aa27.47■■□□□ 1.99
CCNA1-203ENST00000625767 CUL7Q14999 1698 aa27.45■■□□□ 1.99
CCNA1-203ENST00000625767 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
CCNA1-203ENST00000625767 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
CCNA1-203ENST00000625767 CARMIL1Q5VZK9 1371 aa27.41■■□□□ 1.98
CCNA1-203ENST00000625767 PRXQ9BXM0 1461 aa27.4■■□□□ 1.98
CCNA1-203ENST00000625767 FHAD1B1AJZ9 1412 aa27.37■■□□□ 1.97
CCNA1-203ENST00000625767 CHD1O14646 1710 aa27.37■■□□□ 1.97
CCNA1-203ENST00000625767 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
CCNA1-203ENST00000625767 RAPGEF2Q9Y4G8 1499 aa27.34■■□□□ 1.97
CCNA1-203ENST00000625767 KIF21BO75037 1637 aa27.34■■□□□ 1.97
CCNA1-203ENST00000625767 FBLN2P98095 1184 aa27.32■■□□□ 1.96
CCNA1-203ENST00000625767 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
CCNA1-203ENST00000625767 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
CCNA1-203ENST00000625767 LOC105371045A0A1W2PR82 267 aa27.25■■□□□ 1.95
CCNA1-203ENST00000625767 GOLGA3Q08378 1498 aa27.21■■□□□ 1.95
CCNA1-203ENST00000625767 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
CCNA1-203ENST00000625767 CTTNBP2Q8WZ74 1663 aa27.11■■□□□ 1.93
CCNA1-203ENST00000625767 UBTFP17480 764 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms