RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-222	ENST00000600320	FAM74A4	Q5TZK3	123 aa		14.02	□□□□□ -0.17
SHKBP1-222	ENST00000600320	C14orf178	Q8N769	122 aa	Predicted RBP	14.02	□□□□□ -0.17
SHKBP1-222	ENST00000600320	VSIG2	Q96IQ7	327 aa		14.02	□□□□□ -0.17
SHKBP1-222	ENST00000600320	KIF25-AS1	Q9Y6Z4	181 aa		14.02	□□□□□ -0.17
SHKBP1-222	ENST00000600320	TRAV26-1	A0A087WT03	109 aa		14.01	□□□□□ -0.17
SHKBP1-222	ENST00000600320		A0A0J9YY99	117 aa		14.01	□□□□□ -0.17
SHKBP1-222	ENST00000600320	TWIST1	Q15672	202 aa		14.01	□□□□□ -0.17
SHKBP1-222	ENST00000600320	AP1S3	Q96PC3	154 aa		14.01	□□□□□ -0.17
SHKBP1-222	ENST00000600320		A0A1B0GUT8	65 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	GATA1	P15976	413 aa	Predicted RBP	14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	EVI2A	P22794	236 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	CRYBA4	P53673	196 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	ZFP2	Q6ZN57	461 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	CTDSP1	Q9GZU7	261 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	HHLA3	Q9XRX5	114 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	KLK5	Q9Y337	293 aa	Predicted RBP	14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	STARD9	Q9P2P6	4700 aa		14	□□□□□ -0.17
SHKBP1-222	ENST00000600320	RHOD	O00212	210 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	CIDEA	O60543	219 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	FAM3B	P58499	235 aa	Predicted RBP	13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	LINC00315	P59091	139 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	RHEB	Q15382	184 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	SVBP	Q8N300	66 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	BORCS7	Q96B45	105 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	PRO0255	Q9UI72	69 aa		13.99	□□□□□ -0.17
SHKBP1-222	ENST00000600320	TRGC1	P0CF51	173 aa		13.98	□□□□□ -0.17
SHKBP1-222	ENST00000600320	RPS10P5	Q9NQ39	176 aa		13.98	□□□□□ -0.17
SHKBP1-222	ENST00000600320	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	PAX4	O43316	350 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	SNAPIN	O95295	136 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	RIG	Q13278	110 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	ATRAID	Q6UW56	229 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	FAM210B	Q96KR6	192 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320	APLN	Q9ULZ1	77 aa		13.97	□□□□□ -0.17
SHKBP1-222	ENST00000600320		A0A087WWC5	75 aa		13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	LOC100131303	A0A0U1RQF7	123 aa		13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	MGP	P08493	103 aa		13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	SLA	Q13239	276 aa		13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	MRPL54	Q6P161	138 aa	Known RBP	13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	SLC25A29	Q8N8R3	303 aa		13.96	□□□□□ -0.17
SHKBP1-222	ENST00000600320	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.95	□□□□□ -0.18
SHKBP1-222	ENST00000600320	SMIM17	P0DL12	118 aa		13.95	□□□□□ -0.18
SHKBP1-222	ENST00000600320	ZNF56	Q15929	161 aa		13.95	□□□□□ -0.18
SHKBP1-222	ENST00000600320	DPH3P1	Q9H4G8	78 aa		13.95	□□□□□ -0.18
SHKBP1-222	ENST00000600320		Q9UF83	564 aa		13.95	□□□□□ -0.18
SHKBP1-222	ENST00000600320	TRBV6-4	A0A1B0GX49	114 aa		13.94	□□□□□ -0.18
SHKBP1-222	ENST00000600320		A0A1B0GXF2	115 aa		13.94	□□□□□ -0.18
SHKBP1-222	ENST00000600320	IMMP2L	Q96T52	175 aa		13.94	□□□□□ -0.18
SHKBP1-222	ENST00000600320	TMEM242	Q9NWH2	141 aa		13.94	□□□□□ -0.18
SHKBP1-222	ENST00000600320		H3BNG1	76 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320		K7EQD1	137 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320	NUDT3	O95989	172 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320		P0DMU3	169 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320	FAM231A	P0DMU4	169 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320	FAM231C	P0DMU5	169 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320	GYPE	P15421	78 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320	RAB4B	P61018	213 aa		13.93	□□□□□ -0.18
SHKBP1-222	ENST00000600320		A0A096LPF7	62 aa		13.92	□□□□□ -0.18
SHKBP1-222	ENST00000600320		F5H697	171 aa		13.92	□□□□□ -0.18
SHKBP1-222	ENST00000600320	CAMP	P49913	170 aa		13.92	□□□□□ -0.18
SHKBP1-222	ENST00000600320	RHOH	Q15669	191 aa		13.92	□□□□□ -0.18
SHKBP1-222	ENST00000600320	CSMD3	Q7Z407	3707 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	SUMO4	Q6EEV6	95 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	SMIM15	Q7Z3B0	74 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	C15orf53	Q8NAA6	179 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	RNF185	Q96GF1	192 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	PRADC1	Q9BSG0	188 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	TMEM191A	Q9H0A3	160 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	URGCP-MRPS24	S4R325	110 aa		13.91	□□□□□ -0.18
SHKBP1-222	ENST00000600320	TCTA	P57738	103 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	HBB	P68871	147 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	KCNIP4	Q6PIL6	250 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	AMN1	Q8IY45	258 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	BTF3L4	Q96K17	158 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	ICOS	Q9Y6W8	199 aa		13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320	PLEC	Q15149	4684 aa	Known RBP	13.9	□□□□□ -0.18
SHKBP1-222	ENST00000600320		A0A1B0GW15	77 aa		13.89	□□□□□ -0.19
SHKBP1-222	ENST00000600320	ATP5L2	Q7Z4Y8	100 aa		13.89	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GATD1	Q8NB37	220 aa		13.89	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAGE12J	A6NER3	117 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320		M0QY20	66 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	LINC00694	P0DN24	101 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAGE1	Q13065	139 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAGE4	Q13068	117 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAGE5	Q13069	117 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAGE13	Q4V321	117 aa		13.88	□□□□□ -0.19
SHKBP1-222	ENST00000600320	TRAV26-2	A0A0B4J265	109 aa		13.87	□□□□□ -0.19
SHKBP1-222	ENST00000600320	RAB4A	P20338	218 aa		13.87	□□□□□ -0.19
SHKBP1-222	ENST00000600320	S100P	P25815	95 aa		13.87	□□□□□ -0.19
SHKBP1-222	ENST00000600320	MRPL23	Q16540	153 aa	Known RBP	13.87	□□□□□ -0.19
SHKBP1-222	ENST00000600320	NEXN-AS1	Q8NBZ9	246 aa		13.87	□□□□□ -0.19
SHKBP1-222	ENST00000600320	TRAV9-1	A0A075B6T8	112 aa		13.86	□□□□□ -0.19
SHKBP1-222	ENST00000600320	GAS8-AS1	O95177	125 aa		13.86	□□□□□ -0.19
SHKBP1-222	ENST00000600320	S100A8	P05109	93 aa		13.86	□□□□□ -0.19
SHKBP1-222	ENST00000600320	TRBV10-1	A0A0K0K1A3	114 aa		13.85	□□□□□ -0.19
SHKBP1-222	ENST00000600320	SRI	P30626	198 aa		13.85	□□□□□ -0.19
SHKBP1-222	ENST00000600320	FAM104B	Q5XKR9	115 aa		13.85	□□□□□ -0.19
SHKBP1-222	ENST00000600320	RYR3	Q15413	4870 aa		13.85	□□□□□ -0.19
SHKBP1-222	ENST00000600320	RASL11A	Q6T310	242 aa		13.84	□□□□□ -0.19
SHKBP1-222	ENST00000600320	ZNRF2	Q8NHG8	242 aa		13.84	□□□□□ -0.19

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