RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 C3orf84H3BNL1 204 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 RHODO00212 210 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 SNAPINO95295 136 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 HTN3P15516 51 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 SLAQ13239 276 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 AP1S3Q96PC3 154 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 SAMD10Q9BYL1 202 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
APOC1-206ENST00000590334 F5H768 121 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 H3BNG1 76 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 IGHV3-53P01767 116 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 TRGC1P0CF51 173 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.06
APOC1-206ENST00000590334 SSTP61278 116 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 TWIST1Q15672 202 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
APOC1-206ENST00000590334 A0A087WWL8 130 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 TRGV4A0A0C4DH28 118 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 CRYBA4P53673 196 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 LINC00315P59091 139 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 RIGQ13278 110 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 C14orf178Q8N769 122 aaPredicted RBP8.45□□□□□ -1.06
APOC1-206ENST00000590334 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
APOC1-206ENST00000590334 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
APOC1-206ENST00000590334 A0A1B0GW15 77 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 TRBV6-4A0A1B0GX49 114 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 EVI2AP22794 236 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 TCTAP57738 103 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 FAM3BP58499 235 aaPredicted RBP8.44□□□□□ -1.06
APOC1-206ENST00000590334 RAB4BP61018 213 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 TMEM88Q6PEY1 159 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 VSIG2Q96IQ7 327 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
APOC1-206ENST00000590334 TRAV9-1A0A075B6T8 112 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 TRAV26-1A0A087WT03 109 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 SMIM17P0DL12 118 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 Q6ZSN1 163 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 ATP5L2Q7Z4Y8 100 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 TMEM191AQ9H0A3 160 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
APOC1-206ENST00000590334 IGLL5B9A064 214 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 PAX4O43316 350 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 KCNIP4Q6PIL6 250 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 APLNQ9ULZ1 77 aa8.42□□□□□ -1.06
APOC1-206ENST00000590334 PLECQ15149 4684 aaKnown RBP8.41□□□□□ -1.06
APOC1-206ENST00000590334 HBBP68871 147 aa8.41□□□□□ -1.06
APOC1-206ENST00000590334 RHOHQ15669 191 aa8.41□□□□□ -1.06
APOC1-206ENST00000590334 ATRAIDQ6UW56 229 aa8.41□□□□□ -1.06
APOC1-206ENST00000590334 FRZBQ92765 325 aa8.41□□□□□ -1.06
APOC1-206ENST00000590334 LYSTQ99698 3801 aa8.41□□□□□ -1.06
APOC1-206ENST00000590334 A0A0J9YY99 117 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 K7EQD1 137 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 S100A8P05109 93 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 S100PP25815 95 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 ZNF56Q15929 161 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
APOC1-206ENST00000590334 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 PRADC1Q9BSG0 188 aa8.4□□□□□ -1.06
APOC1-206ENST00000590334 A0A096LPF7 62 aa8.39□□□□□ -1.07
APOC1-206ENST00000590334 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 F5H697 171 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 M0QY20 66 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 MGPP08493 103 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 LINC00694P0DN24 101 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 GYPEP15421 78 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 RAB4AP20338 218 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 CAMPP49913 170 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
APOC1-206ENST00000590334 SUMO4Q6EEV6 95 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 Q9UF83 564 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 URGCP-MRPS24S4R325 110 aa8.38□□□□□ -1.07
APOC1-206ENST00000590334 H7C1H1 209 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 ELOBQ15370 118 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 YPEL4Q96NS1 127 aa8.37□□□□□ -1.07
APOC1-206ENST00000590334 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 NUDT3O95989 172 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 P0DMU3 169 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 FAM231AP0DMU4 169 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 FAM231CP0DMU5 169 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 MRAP2Q96G30 205 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 DNAJC30Q96LL9 226 aa8.36□□□□□ -1.07
APOC1-206ENST00000590334 VPS13DQ5THJ4 4388 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms