RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KCNIP4Q6PIL6 250 aa11.21□□□□□ -0.61
CSNK1D-212ENST00000580061 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
CSNK1D-212ENST00000580061 C14orf178Q8N769 122 aaPredicted RBP11.21□□□□□ -0.61
CSNK1D-212ENST00000580061 KIF25-AS1Q9Y6Z4 181 aa11.21□□□□□ -0.61
CSNK1D-212ENST00000580061 A0A087WWL8 130 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 DEFB131BA0A096LNP1 70 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 ATP6V1G1O75348 118 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 HTN3P15516 51 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 EVI2AP22794 236 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 FHL2Q14192 279 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 PHLDA1Q8WV24 401 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-212ENST00000580061 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 F5H768 121 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 RHODO00212 210 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 S100PP25815 95 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 MRPL54Q6P161 138 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 ATP5L2Q7Z4Y8 100 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
CSNK1D-212ENST00000580061 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 A0A1B0GW15 77 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 LINC00315P59091 139 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 SMIM15Q7Z3B0 74 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 CSMD3Q7Z407 3707 aa11.18□□□□□ -0.62
CSNK1D-212ENST00000580061 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 S100A1P23297 94 aa11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 CAMPP49913 170 aa11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 HBBP68871 147 aa11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 MUC7Q8TAX7 377 aa11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 TMEM191AQ9H0A3 160 aa11.17□□□□□ -0.62
CSNK1D-212ENST00000580061 CRYBA4P53673 196 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 SLAQ13239 276 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 Q6ZSN1 163 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 PRO0255Q9UI72 69 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
CSNK1D-212ENST00000580061 S100A8P05109 93 aa11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 RAB4BP61018 213 aa11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 ELOBQ15370 118 aa11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 ZNF56Q15929 161 aa11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.62
CSNK1D-212ENST00000580061 TRAV26-1A0A087WT03 109 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 TRBV6-4A0A1B0GX49 114 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 NUPR2A6NF83 97 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 MGPP08493 103 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 RASL11AQ6T310 242 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 CBLN2Q8IUK8 224 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 SLC25A29Q8N8R3 303 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
CSNK1D-212ENST00000580061 STARD9Q9P2P6 4700 aa11.13□□□□□ -0.63
CSNK1D-212ENST00000580061 F5H697 171 aa11.13□□□□□ -0.63
CSNK1D-212ENST00000580061 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
CSNK1D-212ENST00000580061 FAM210BQ96KR6 192 aa11.13□□□□□ -0.63
CSNK1D-212ENST00000580061 YPEL4Q96NS1 127 aa11.13□□□□□ -0.63
CSNK1D-212ENST00000580061 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 TGIF2-C20orf24A0A0A6YYL0 155 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 A0A0J9YY99 117 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 H3BNG1 76 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 PAX4O43316 350 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 RAB4AP20338 218 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 RHOHQ15669 191 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
CSNK1D-212ENST00000580061 IGLL5B9A064 214 aa11.11□□□□□ -0.63
CSNK1D-212ENST00000580061 K7EQD1 137 aa11.11□□□□□ -0.63
CSNK1D-212ENST00000580061 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
CSNK1D-212ENST00000580061 KLK5Q9Y337 293 aaPredicted RBP11.11□□□□□ -0.63
CSNK1D-212ENST00000580061 M0QY20 66 aa11.1□□□□□ -0.63
CSNK1D-212ENST00000580061 SCO1O75880 301 aa11.1□□□□□ -0.63
CSNK1D-212ENST00000580061 TMEM136Q6ZRR5 245 aa11.1□□□□□ -0.63
CSNK1D-212ENST00000580061 PRADC1Q9BSG0 188 aa11.1□□□□□ -0.63
CSNK1D-212ENST00000580061 Q9UF83 564 aa11.1□□□□□ -0.63
CSNK1D-212ENST00000580061 TRAV26-2A0A0B4J265 109 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 C3orf84H3BNL1 204 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 P0DMU3 169 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 FRZBQ92765 325 aa11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 PLECQ15149 4684 aaKnown RBP11.09□□□□□ -0.63
CSNK1D-212ENST00000580061 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 H7C1H1 209 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 GYPEP15421 78 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 COX19Q49B96 90 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 C15orf53Q8NAA6 179 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
CSNK1D-212ENST00000580061 A0A096LPF7 62 aa11.07□□□□□ -0.64
CSNK1D-212ENST00000580061 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
CSNK1D-212ENST00000580061 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
CSNK1D-212ENST00000580061 ICOSQ9Y6W8 199 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms