RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 TPRP12270 2363 aaKnown RBP4.14□□□□□ -1.75
LINC01541-202ENST00000568095 IGHV3-72A0A0B4J1Y9 119 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 TRAV4A0A0B4J268 109 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 ZNF815PA8K554 130 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 BUB1B-PAK6H3BSN5 160 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 CRLF1O75462 422 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 ORM1P02763 201 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 CRYGDP07320 174 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 IFITM1P13164 125 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 KLK9Q2XQG4 91 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 LYPD2Q6UXB3 125 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 DYNAPQ8N1N2 210 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 ODF3Q96PU9 254 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 KLK9Q9UKQ9 250 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 ABCA4P78363 2273 aa4.14□□□□□ -1.75
LINC01541-202ENST00000568095 ICE1Q9Y2F5 2266 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 LOC107984156A0A0G2JMH3 177 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 NDUFB3O43676 98 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 HLA-DMBP28068 263 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 GAGE2BQ13066 116 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 GAGE2EQ4V326 116 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 HIST2H2BDQ6DRA6 164 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 ARL17AQ8IVW1 177 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 GAGE2DQ9UEU5 116 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 PKDREJQ9NTG1 2253 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 SLC25A20O43772 301 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 VPREB1P12018 145 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 LY6G5BQ8NDX9 201 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 NPBQ8NG41 125 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 DUX5Q96PT3 197 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 SCGB3A1Q96QR1 104 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 PDZD2O15018 2839 aa4.13□□□□□ -1.75
LINC01541-202ENST00000568095 TRAV26-2A0A0B4J265 109 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 FAM229AH3BQW9 127 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 M0R381 172 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 SCGB1C2P0DMR2 95 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 DEFB121Q5J5C9 76 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 TMEM263Q8WUH6 116 aaKnown RBP4.12□□□□□ -1.75
LINC01541-202ENST00000568095 PRO1854Q9UHT4 67 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 A0A0B4J2C4 111 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 PRAC2D3DTV9 90 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 TSHBP01222 138 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 SMIM20Q8N5G0 67 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 NRGNQ92686 78 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 MRPL53Q96EL3 112 aaKnown RBP4.12□□□□□ -1.75
LINC01541-202ENST00000568095 ROS1P08922 2347 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 CACNA1BQ00975 2339 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 IGHV1-69DA0A0B4J2H0 117 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 IGHV3-33P01772 117 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 CRIP2P52943 208 aaPredicted RBP4.12□□□□□ -1.75
LINC01541-202ENST00000568095 SUMO2P61956 95 aaKnown RBP4.12□□□□□ -1.75
LINC01541-202ENST00000568095 PAPPA-AS1Q5QFB9 102 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 APCP25054 2843 aa4.12□□□□□ -1.75
LINC01541-202ENST00000568095 CR1P17927 2039 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 IGIPA6NJ69 53 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 C11orf86A6NJI1 115 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 SNCGO76070 127 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC01541-202ENST00000568095 C9orf47Q6ZRZ4 202 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 PLXNB1O43157 2135 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 SPTBN1Q01082 2364 aaKnown RBP4.11□□□□□ -1.75
LINC01541-202ENST00000568095 A0A096LNT2 108 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 FAM240AA0A1B0GVK7 77 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 CTSGP08311 255 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 TSPEAR-AS2P59090 65 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 C2orf66Q6UXQ4 117 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 KLHL30-AS1Q8NEE0 82 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 OR10J6PQ8NGY7 276 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 TMEM126AQ9H061 195 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
LINC01541-202ENST00000568095 TRAV8-2A0A0B4J237 113 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TRBV7-7A0A0K0K1E9 115 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 LYNX1G3V0Z9 82 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 LYNX1P0DP58 116 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 MED14OSP0DP75 135 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 PRTN3P24158 256 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TTC32Q5I0X7 151 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 SCGB1D4Q6XE38 83 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 DYNLRB1Q9NP97 96 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 A0A0J9YX75 114 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 LGALS9O00182 355 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 NBR2O15453 112 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 PLA2G2AP14555 144 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 FAM159AQ6UWV7 190 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 Q6ZQT7 251 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 CCL17Q92583 94 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TIMD4Q96H15 378 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 LINC01587Q99440 93 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 C21orf62Q9NYP8 219 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 MYO18BQ8IUG5 2567 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TRBV30A0A0K0K1B3 111 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 TRBV10-2A0A0K0K1G8 114 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 C9JAW5 83 aa4.1□□□□□ -1.75
LINC01541-202ENST00000568095 BUB3O43684 328 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms