RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CHCHD1Q96BP2 118 aaKnown RBP6.98□□□□□ -1.29
LINC00838-201ENST00000562956 TRAV2A0A0B4J234 112 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 RNASE3P12724 160 aaKnown RBP6.97□□□□□ -1.29
LINC00838-201ENST00000562956 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 LOC389332A0A1B0GUA5 103 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 ADARB2-AS1A8MUL3 147 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 DUSP14O95147 198 aaKnown RBP6.97□□□□□ -1.29
LINC00838-201ENST00000562956 CACNG7P62955 275 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 TMEM97Q5BJF2 176 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 K7EMI3 77 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 M0R381 172 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 NPYP01303 97 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 AZU1P20160 251 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
LINC00838-201ENST00000562956 FAM159AQ6UWV7 190 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 SIGLEC8Q9NYZ4 499 aa6.97□□□□□ -1.29
LINC00838-201ENST00000562956 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
LINC00838-201ENST00000562956 HIVEP1P15822 2718 aa6.96□□□□□ -1.29
LINC00838-201ENST00000562956 KRTAP10-3P60369 221 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 NSUN5P1Q3KNT7 163 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 PRSS3P2Q8NHM4 247 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 MAP6D1Q9H9H5 199 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 PHLDA3Q9Y5J5 127 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 NIPBLQ6KC79 2804 aaeCLIP6.96□□□□□ -1.3
LINC00838-201ENST00000562956 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.3
LINC00838-201ENST00000562956 H3BMM0 161 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 HLA-DRB4P13762 266 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 SPCS1Q9Y6A9 102 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 HLA-DRB4X5D2U9 266 aa6.96□□□□□ -1.3
LINC00838-201ENST00000562956 CD7P09564 240 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 GATA1P15976 413 aaPredicted RBP6.95□□□□□ -1.3
LINC00838-201ENST00000562956 SPAG8Q99932 426 aaPredicted RBP6.95□□□□□ -1.3
LINC00838-201ENST00000562956 TRAV26-2A0A0B4J265 109 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1BA6NDE4 496 aaKnown RBP6.95□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1EA6NEQ0 496 aaKnown RBP6.95□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1DP0C7P1 496 aaKnown RBP6.95□□□□□ -1.3
LINC00838-201ENST00000562956 FA2HQ7L5A8 372 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
LINC00838-201ENST00000562956 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 NSD1Q96L73 2696 aaPredicted RBP6.94□□□□□ -1.3
LINC00838-201ENST00000562956 A8MTW9 85 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1A1P0DJD3 496 aaKnown RBP6.94□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1CP0DJD4 496 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 RBMY1FQ15415 496 aaKnown RBP6.94□□□□□ -1.3
LINC00838-201ENST00000562956 SORL1Q92673 2214 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 TRAV25A0A0B4J276 109 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 K7EP34 96 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 CRXO43186 299 aaPredicted RBP6.94□□□□□ -1.3
LINC00838-201ENST00000562956 TNFRSF6BO95407 300 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 Q8N1Y9 231 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 C14orf178Q8N769 122 aaPredicted RBP6.94□□□□□ -1.3
LINC00838-201ENST00000562956 MDFICQ9P1T7 246 aa6.94□□□□□ -1.3
LINC00838-201ENST00000562956 AGRNO00468 2067 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 FN1P02751 2386 aaKnown RBP6.93□□□□□ -1.3
LINC00838-201ENST00000562956 IGHV3-16A0A0C4DH30 117 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 COX8AP10176 69 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 NMUP48645 174 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 ODF3L2Q3SX64 289 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 WNK1Q9H4A3 2382 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 IGHV1OR15-1A0A075B7D0 117 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 NXPH4O95158 308 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 SVIPQ8NHG7 77 aa6.93□□□□□ -1.3
LINC00838-201ENST00000562956 A0A096LNJ9 63 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 K7ERJ3 54 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 NRACQ8N912 160 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 MAP1LC3AQ9H492 121 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 A6NDN8 102 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 CRLF1O75462 422 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 C9orf85Q96MD7 179 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 DPH3P1Q9H4G8 78 aa6.92□□□□□ -1.3
LINC00838-201ENST00000562956 SEC11AP67812 179 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 PET117Q6UWS5 81 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 PCP2Q8IVA1 136 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 JPT2Q9H910 190 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 PRM2P04554 102 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 GCSHP23434 173 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
LINC00838-201ENST00000562956 A0A1W2PPM0 123 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.9□□□□□ -1.3
LINC00838-201ENST00000562956 HTN1P15515 57 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 SIGMAR1Q99720 223 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 H3BRM9 83 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 IGLV1-51P01701 117 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 MGPP08493 103 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 KIF25-AS1Q9Y6Z4 181 aa6.9□□□□□ -1.3
LINC00838-201ENST00000562956 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 LINC01546A6NGU7 62 aa6.9□□□□□ -1.31
LINC00838-201ENST00000562956 OR11H12B2RN74 326 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms