RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 BTF3L4Q96K17 158 aa16.34■□□□□ 0.21
HOMER3-205ENST00000542541 DEFB131BA0A096LNP1 70 aa16.33■□□□□ 0.2
HOMER3-205ENST00000542541 TRAV9-1A0A075B6T8 112 aa16.32■□□□□ 0.2
HOMER3-205ENST00000542541 F5H768 121 aa16.32■□□□□ 0.2
HOMER3-205ENST00000542541 S100A1P23297 94 aa16.32■□□□□ 0.2
HOMER3-205ENST00000542541 FAM74A4Q5TZK3 123 aa16.32■□□□□ 0.2
HOMER3-205ENST00000542541 ATP5L2Q7Z4Y8 100 aa16.32■□□□□ 0.2
HOMER3-205ENST00000542541 C14orf178Q8N769 122 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-205ENST00000542541 A0A087WWL8 130 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 TRGV4A0A0C4DH28 118 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 S100A8P05109 93 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 CRYGDP07320 174 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 SLAQ13239 276 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 ATRAIDQ6UW56 229 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 PHLDA1Q8WV24 401 aaPredicted RBP16.31■□□□□ 0.2
HOMER3-205ENST00000542541 SAMD10Q9BYL1 202 aa16.31■□□□□ 0.2
HOMER3-205ENST00000542541 ATP6V1G1O75348 118 aa16.3■□□□□ 0.2
HOMER3-205ENST00000542541 EVI2AP22794 236 aa16.3■□□□□ 0.2
HOMER3-205ENST00000542541 MRPL54Q6P161 138 aaKnown RBP16.3■□□□□ 0.2
HOMER3-205ENST00000542541 DPH3P1Q9H4G8 78 aa16.3■□□□□ 0.2
HOMER3-205ENST00000542541 URGCP-MRPS24S4R325 110 aa16.3■□□□□ 0.2
HOMER3-205ENST00000542541 FHL2Q14192 279 aa16.29■□□□□ 0.2
HOMER3-205ENST00000542541 UFSP1Q6NVU6 142 aa16.29■□□□□ 0.2
HOMER3-205ENST00000542541 IGHV3-73A0A0B4J1V6 119 aa16.28■□□□□ 0.2
HOMER3-205ENST00000542541 CAMPP49913 170 aa16.28■□□□□ 0.2
HOMER3-205ENST00000542541 HBBP68871 147 aa16.28■□□□□ 0.2
HOMER3-205ENST00000542541 HOXA5P20719 270 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 MUC7Q8TAX7 377 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 TMEM191AQ9H0A3 160 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 PRO0255Q9UI72 69 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 HHLA3Q9XRX5 114 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 KIF25-AS1Q9Y6Z4 181 aa16.27■□□□□ 0.2
HOMER3-205ENST00000542541 A0A1B0GXF2 115 aa16.27■□□□□ 0.19
HOMER3-205ENST00000542541 SMCO4Q9NRQ5 59 aa16.27■□□□□ 0.19
HOMER3-205ENST00000542541 DNAH7Q8WXX0 4024 aa16.26■□□□□ 0.19
HOMER3-205ENST00000542541 F5H697 171 aa16.26■□□□□ 0.19
HOMER3-205ENST00000542541 RASL11AQ6T310 242 aa16.26■□□□□ 0.19
HOMER3-205ENST00000542541 NUPR2A6NF83 97 aa16.25■□□□□ 0.19
HOMER3-205ENST00000542541 GATA1P15976 413 aaPredicted RBP16.25■□□□□ 0.19
HOMER3-205ENST00000542541 RAB4BP61018 213 aa16.25■□□□□ 0.19
HOMER3-205ENST00000542541 ZNF56Q15929 161 aa16.25■□□□□ 0.19
HOMER3-205ENST00000542541 FAM210BQ96KR6 192 aa16.25■□□□□ 0.19
HOMER3-205ENST00000542541 TRBV6-4A0A1B0GX49 114 aa16.24■□□□□ 0.19
HOMER3-205ENST00000542541 MGPP08493 103 aa16.24■□□□□ 0.19
HOMER3-205ENST00000542541 CEMP1Q6PRD7 247 aaPredicted RBP16.24■□□□□ 0.19
HOMER3-205ENST00000542541 LINC00315P59091 139 aa16.23■□□□□ 0.19
HOMER3-205ENST00000542541 PAX4O43316 350 aa16.23■□□□□ 0.19
HOMER3-205ENST00000542541 CRYBA4P53673 196 aa16.23■□□□□ 0.19
HOMER3-205ENST00000542541 KLK5Q9Y337 293 aaPredicted RBP16.23■□□□□ 0.19
HOMER3-205ENST00000542541 TRAV26-1A0A087WT03 109 aa16.22■□□□□ 0.19
HOMER3-205ENST00000542541 ELOBQ15370 118 aa16.22■□□□□ 0.19
HOMER3-205ENST00000542541 SLC25A29Q8N8R3 303 aa16.22■□□□□ 0.19
HOMER3-205ENST00000542541 PRADC1Q9BSG0 188 aa16.22■□□□□ 0.19
HOMER3-205ENST00000542541 H3BNG1 76 aa16.21■□□□□ 0.19
HOMER3-205ENST00000542541 RHOHQ15669 191 aa16.21■□□□□ 0.19
HOMER3-205ENST00000542541 TMEM88Q6PEY1 159 aa16.21■□□□□ 0.19
HOMER3-205ENST00000542541 GATD1Q8NB37 220 aa16.21■□□□□ 0.19
HOMER3-205ENST00000542541 COX19Q49B96 90 aa16.2■□□□□ 0.18
HOMER3-205ENST00000542541 Q6ZSN1 163 aa16.2■□□□□ 0.18
HOMER3-205ENST00000542541 CBLN2Q8IUK8 224 aa16.2■□□□□ 0.18
HOMER3-205ENST00000542541 FRZBQ92765 325 aa16.2■□□□□ 0.18
HOMER3-205ENST00000542541 TRBV24-1A0A075B6N3 115 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 A0A0J9YY99 117 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 H7C1H1 209 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 NACAE9PAV3 2078 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 IGLL5B9A064 214 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 K7EQD1 137 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 FAM104BQ5XKR9 115 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 AMN1Q8IY45 258 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 VSIG2Q96IQ7 327 aa16.19■□□□□ 0.18
HOMER3-205ENST00000542541 RAB4AP20338 218 aa16.18■□□□□ 0.18
HOMER3-205ENST00000542541 ZFAND6Q6FIF0 208 aa16.18■□□□□ 0.18
HOMER3-205ENST00000542541 TGIF2-C20orf24A0A0A6YYL0 155 aa16.17■□□□□ 0.18
HOMER3-205ENST00000542541 TRBV10-1A0A0K0K1A3 114 aa16.17■□□□□ 0.18
HOMER3-205ENST00000542541 C3orf84H3BNL1 204 aa16.17■□□□□ 0.18
HOMER3-205ENST00000542541 SUMO4Q6EEV6 95 aa16.17■□□□□ 0.18
HOMER3-205ENST00000542541 C15orf53Q8NAA6 179 aa16.16■□□□□ 0.18
HOMER3-205ENST00000542541 RNF185Q96GF1 192 aa16.16■□□□□ 0.18
HOMER3-205ENST00000542541 M0QY20 66 aa16.16■□□□□ 0.18
HOMER3-205ENST00000542541 MRAP2Q96G30 205 aa16.16■□□□□ 0.18
HOMER3-205ENST00000542541 GNB1LQ9BYB4 327 aa16.16■□□□□ 0.18
HOMER3-205ENST00000542541 GYPEP15421 78 aa16.15■□□□□ 0.18
HOMER3-205ENST00000542541 TCTAP57738 103 aa16.15■□□□□ 0.18
HOMER3-205ENST00000542541 YPEL4Q96NS1 127 aa16.15■□□□□ 0.18
HOMER3-205ENST00000542541 CSMD3Q7Z407 3707 aa16.15■□□□□ 0.18
HOMER3-205ENST00000542541 HLA-DQA1P01909 254 aa16.14■□□□□ 0.17
HOMER3-205ENST00000542541 MRPL23Q16540 153 aaKnown RBP16.14■□□□□ 0.17
HOMER3-205ENST00000542541 TMEM136Q6ZRR5 245 aa16.14■□□□□ 0.17
HOMER3-205ENST00000542541 ICOSQ9Y6W8 199 aa16.14■□□□□ 0.17
HOMER3-205ENST00000542541 MT-ND6P03923 174 aa16.13■□□□□ 0.17
HOMER3-205ENST00000542541 TRAV26-2A0A0B4J265 109 aa16.12■□□□□ 0.17
HOMER3-205ENST00000542541 NUDT3O95989 172 aa16.12■□□□□ 0.17
HOMER3-205ENST00000542541 RPL36AP83881 106 aaKnown RBP16.12■□□□□ 0.17
HOMER3-205ENST00000542541 MRPL51Q4U2R6 128 aaKnown RBP16.12■□□□□ 0.17
HOMER3-205ENST00000542541 RPL36ALQ969Q0 106 aaKnown RBP16.12■□□□□ 0.17
HOMER3-205ENST00000542541 SH2D6Q7Z4S9 175 aa16.12■□□□□ 0.17
HOMER3-205ENST00000542541 DNAJC30Q96LL9 226 aa16.12■□□□□ 0.17
HOMER3-205ENST00000542541 NIT2Q9NQR4 276 aa16.12■□□□□ 0.17
HOMER3-205ENST00000542541 SCO1O75880 301 aa16.11■□□□□ 0.17
HOMER3-205ENST00000542541 PPP1R17O96001 155 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms