RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 TPPP2P59282 170 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 PPP3R1P63098 170 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 C9orf116Q5BN46 136 aaPredicted RBP1.06□□□□□ -2.24
VBP1-203ENST00000535916 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 DEFB119Q8N690 84 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 C10orf82Q8WW14 230 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 AMELYQ99218 206 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 RPRMQ9NS64 109 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 COA4Q9NYJ1 87 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 IER3IP1Q9Y5U9 82 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 ROBO1Q9Y6N7 1651 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 CCNB3Q8WWL7 1395 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 VPS8Q8N3P4 1428 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 MUC4Q99102 2169 aa1.06□□□□□ -2.24
VBP1-203ENST00000535916 SCN3AQ9NY46 2000 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 IGKV2-29A2NJV5 120 aaPredicted RBP1.05□□□□□ -2.24
VBP1-203ENST00000535916 SNCGO76070 127 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 CCKP06307 115 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 NPC2P61916 151 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 CATR1Q13166 79 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 C10orf105Q8TEF2 133 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 PPP3R2Q96LZ3 170 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 MRPL57Q9BQC6 102 aaKnown RBP1.05□□□□□ -2.24
VBP1-203ENST00000535916 BAZ2BQ9UIF8 2168 aaKnown RBP1.05□□□□□ -2.24
VBP1-203ENST00000535916 RTTNQ86VV8 2226 aa1.05□□□□□ -2.24
VBP1-203ENST00000535916 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 LOC101927531A0A1B0GV80 90 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 OOSP1A8MZH6 123 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 APOC4-APOC2K7ER74 178 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 APOC2P02655 101 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 CBLN1P23435 193 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 RBP2P50120 134 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 FXYD4P59646 89 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 UBE2G1P62253 170 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 INSL4Q14641 139 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 FXYD3Q14802 87 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 C9orf153Q5TBE3 101 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 XAF1Q6GPH4 301 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 MRPL54Q6P161 138 aaKnown RBP1.04□□□□□ -2.24
VBP1-203ENST00000535916 TSKUQ8WUA8 353 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 KDM6BO15054 1643 aa1.04□□□□□ -2.24
VBP1-203ENST00000535916 SPHKAPQ2M3C7 1700 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 EXPH5Q8NEV8 1989 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 PCDH15Q96QU1 1955 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 TRBV10-3A0A0K0K1G6 114 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 TEX49A0A1B0GTD5 131 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 TCRBV3S1A0A5B6 114 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 S100A7L2Q5SY68 101 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 C5orf56Q8N8D9 126 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 DSCR8Q96T75 97 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 CPSF1Q10570 1443 aaKnown RBP1.03□□□□□ -2.24
VBP1-203ENST00000535916 CASKIN1Q8WXD9 1431 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 CNTLNQ9NXG0 1405 aa1.03□□□□□ -2.24
VBP1-203ENST00000535916 RBBP6Q7Z6E9 1792 aaKnown RBP1.03□□□□□ -2.24
VBP1-203ENST00000535916 RP1P56715 2156 aa1.03□□□□□ -2.25
VBP1-203ENST00000535916 LYNX1P0DP58 116 aa1.02□□□□□ -2.25
VBP1-203ENST00000535916 UBE2D1P51668 147 aa1.02□□□□□ -2.25
VBP1-203ENST00000535916 EFNA4P52798 201 aa1.02□□□□□ -2.25
VBP1-203ENST00000535916 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
VBP1-203ENST00000535916 CC2D2AQ9P2K1 1620 aa1.02□□□□□ -2.25
VBP1-203ENST00000535916 FLG2Q5D862 2391 aaPredicted RBP1.01□□□□□ -2.25
VBP1-203ENST00000535916 NRXN2Q9P2S2 1712 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 CLPSL1A2RUU4 121 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 IFNA17P01571 189 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 CCL8P80075 99 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 HSD52Q0P140 79 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 RPL7L1Q6DKI1 246 aaKnown RBP1.01□□□□□ -2.25
VBP1-203ENST00000535916 LINC00575Q6W349 94 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 Q6ZQY7 126 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 CYP2G1PQ6ZSU1 146 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 CCL19Q99731 98 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 RP1L1Q8IWN7 2480 aaPredicted RBP1.01□□□□□ -2.25
VBP1-203ENST00000535916 ARFGEF3Q5TH69 2177 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 ALPK2Q86TB3 2170 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 MYOFQ9NZM1 2061 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 NWD2Q9ULI1 1742 aa1.01□□□□□ -2.25
VBP1-203ENST00000535916 PXDNQ92626 1479 aa1□□□□□ -2.25
VBP1-203ENST00000535916 TNRC6AQ8NDV7 1962 aaKnown RBP1□□□□□ -2.25
VBP1-203ENST00000535916 NCR3O14931 201 aa1□□□□□ -2.25
VBP1-203ENST00000535916 CCL3L1P16619 93 aa1□□□□□ -2.25
VBP1-203ENST00000535916 RBM3P98179 157 aaKnown RBP1□□□□□ -2.25
VBP1-203ENST00000535916 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
VBP1-203ENST00000535916 C5orf38Q86SI9 138 aa1□□□□□ -2.25
VBP1-203ENST00000535916 C8orf59Q8N0T1 100 aaPredicted RBP1□□□□□ -2.25
VBP1-203ENST00000535916 SPTSSBQ8NFR3 76 aa1□□□□□ -2.25
VBP1-203ENST00000535916 LINC00208Q96KT6 92 aa1□□□□□ -2.25
VBP1-203ENST00000535916 ARAP2Q8WZ64 1704 aa1□□□□□ -2.25
VBP1-203ENST00000535916 MED12LQ86YW9 2145 aa1□□□□□ -2.25
VBP1-203ENST00000535916 CASP8AP2Q9UKL3 1982 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 C10orf71Q711Q0 1435 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 FREM1Q5H8C1 2179 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 TRAV30A0A087WSZ9 112 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 A0A087WTM6 91 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 TMEM218A2RU14 115 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 A6NIN4 97 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 S100A8P05109 93 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 IFITM1P13164 125 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 CAV3P56539 151 aa0.99□□□□□ -2.25
VBP1-203ENST00000535916 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms