RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM53AQ6NSI3 398 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 KLHL30-AS1Q8NEE0 82 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 TM2D3Q9BRN9 247 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 NDUFA4L2Q9NRX3 87 aa3.58□□□□□ -1.84
HMGB1P19-201ENST00000517578 FAM223BA6NKX1 122 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 JMJD7-PLA2G4BH0Y9G9 81 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 H0YGX0 51 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 NTN3O00634 580 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV1-69P01742 117 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 HOXD3P31249 432 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 CRIP1P50238 77 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBE2BP63146 152 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 ADORA2A-AS1P86434 159 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 MIAQ16674 131 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q1T7F1 81 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESRGQ1W209 222 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 MORN5Q5VZ52 161 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 GFRALQ6UXV0 394 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 NRACQ8N912 160 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 C9orf106Q8NAJ2 232 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 LY6G5BQ8NDX9 201 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBL5Q9BZL1 73 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 DEC1Q9P2X7 70 aa3.57□□□□□ -1.84
HMGB1P19-201ENST00000517578 VCYO14598 125 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 EFNA2O43921 213 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGF1P05019 195 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 FKBP1BP68106 108 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 NSUN5P1Q3KNT7 163 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 ZNF876PQ49A33 203 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 SPANXN1Q5VSR9 72 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 PVRIGQ6DKI7 326 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGFL2Q6UWQ7 119 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 TMEM61Q8N0U2 210 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 ZNF491Q8N8L2 437 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL53Q96EL3 112 aaKnown RBP3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 C17orf77Q96MU5 243 aa3.56□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGKV1D-37A0A075B6S9 117 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV3OR16-10A0A075B7F0 116 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 H3BQ85 93 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CCL21O00585 134 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CD59P13987 128 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q0VFX4 171 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 LYPD5Q6UWN5 251 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 VMO1Q7Z5L0 202 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 WDR86Q86TI4 376 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 TMEM167AQ8TBQ9 72 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 KLF14Q8TD94 323 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 AMELXQ99217 191 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CYSTM1Q9H1C7 97 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 CXXC4Q9H2H0 198 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 USF3Q68DE3 2245 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 ABCA7Q8IZY2 2146 aa3.55□□□□□ -1.84
HMGB1P19-201ENST00000517578 UNC13CQ8NB66 2214 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 CABIN1Q9Y6J0 2220 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 CACNA1DQ01668 2161 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 F6UB75 175 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 F8WEM9 126 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 MIFP14174 115 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 APOC4P55056 127 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 PHF5AQ7RTV0 110 aaKnown RBP3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
HMGB1P19-201ENST00000517578 MUC22E2RYF6 1773 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 A0A087WW49 117 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 DEFB108AA8MXU0 73 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 H3BRN7 92 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 M0R1W7 72 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 SPRY2O43597 315 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL33O75394 65 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CD28P10747 220 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PDE6GP18545 87 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 LYZP61626 148 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CXCL6P80162 114 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ECSCRQ19T08 205 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 Q6ZVQ6 151 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 RNASE6Q93091 150 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 UBE2E2Q96LR5 201 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 CCL13Q99616 98 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 FGF23Q9GZV9 251 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PROK2Q9HC23 129 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESM1Q9NQ30 184 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 MRPL36Q9P0J6 103 aaKnown RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 PHLDA3Q9Y5J5 127 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 ESPL1Q14674 2120 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 DOCK7Q96N67 2140 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 NACAE9PAV3 2078 aa3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 TET2Q6N021 2002 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P19-201ENST00000517578 IGHV1OR15-9A0A0B4J2B8 117 aa3.52□□□□□ -1.85
HMGB1P19-201ENST00000517578 SAA1P0DJI8 122 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms