RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 CIDEAO60543 219 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 TWIST1Q15672 202 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 Q6ZSN1 163 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 C14orf178Q8N769 122 aaPredicted RBP11.28□□□□□ -0.6
CLIC4-203ENST00000489758 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
CLIC4-203ENST00000489758 TRGV4A0A0C4DH28 118 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 SNAPINO95295 136 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.61
CLIC4-203ENST00000489758 EVI2AP22794 236 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
CLIC4-203ENST00000489758 LINC00315P59091 139 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CLIC4-203ENST00000489758 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 RHODO00212 210 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 CRYBA4P53673 196 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 BORCS7Q96B45 105 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 RPS10P5Q9NQ39 176 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 PRO0255Q9UI72 69 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
CLIC4-203ENST00000489758 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
CLIC4-203ENST00000489758 IGLL5B9A064 214 aa11.25□□□□□ -0.61
CLIC4-203ENST00000489758 TRGC1P0CF51 173 aa11.25□□□□□ -0.61
CLIC4-203ENST00000489758 RIGQ13278 110 aa11.25□□□□□ -0.61
CLIC4-203ENST00000489758 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
CLIC4-203ENST00000489758 KLK5Q9Y337 293 aaPredicted RBP11.25□□□□□ -0.61
CLIC4-203ENST00000489758 A0A0J9YY99 117 aa11.24□□□□□ -0.61
CLIC4-203ENST00000489758 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
CLIC4-203ENST00000489758 A0A1B0GXF2 115 aa11.24□□□□□ -0.61
CLIC4-203ENST00000489758 SLAQ13239 276 aa11.24□□□□□ -0.61
CLIC4-203ENST00000489758 SLC25A29Q8N8R3 303 aa11.24□□□□□ -0.61
CLIC4-203ENST00000489758 CSMD3Q7Z407 3707 aa11.23□□□□□ -0.61
CLIC4-203ENST00000489758 H3BNG1 76 aa11.23□□□□□ -0.61
CLIC4-203ENST00000489758 PAX4O43316 350 aa11.23□□□□□ -0.61
CLIC4-203ENST00000489758 DPH3P1Q9H4G8 78 aa11.23□□□□□ -0.61
CLIC4-203ENST00000489758 SMIM17P0DL12 118 aa11.22□□□□□ -0.61
CLIC4-203ENST00000489758 RAB4BP61018 213 aa11.22□□□□□ -0.61
CLIC4-203ENST00000489758 MRPL54Q6P161 138 aaKnown RBP11.22□□□□□ -0.61
CLIC4-203ENST00000489758 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
CLIC4-203ENST00000489758 APLNQ9ULZ1 77 aa11.22□□□□□ -0.61
CLIC4-203ENST00000489758 LOC100131303A0A0U1RQF7 123 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 A0A1B0GW15 77 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 MGPP08493 103 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 ZNF56Q15929 161 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 TMEM191AQ9H0A3 160 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 Q9UF83 564 aa11.21□□□□□ -0.61
CLIC4-203ENST00000489758 STARD9Q9P2P6 4700 aa11.21□□□□□ -0.62
CLIC4-203ENST00000489758 K7EQD1 137 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 CAMPP49913 170 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 TCTAP57738 103 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 HBBP68871 147 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 RHOHQ15669 191 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 SUMO4Q6EEV6 95 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 GATD1Q8NB37 220 aa11.2□□□□□ -0.62
CLIC4-203ENST00000489758 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
CLIC4-203ENST00000489758 TRAV9-1A0A075B6T8 112 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 P0DMU3 169 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 FAM231AP0DMU4 169 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 FAM231CP0DMU5 169 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 GYPEP15421 78 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 C15orf53Q8NAA6 179 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 RNF185Q96GF1 192 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 PRADC1Q9BSG0 188 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 URGCP-MRPS24S4R325 110 aa11.19□□□□□ -0.62
CLIC4-203ENST00000489758 A0A096LPF7 62 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 F5H697 171 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 M0QY20 66 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 LINC00694P0DN24 101 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 S100PP25815 95 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 RYR3Q15413 4870 aa11.18□□□□□ -0.62
CLIC4-203ENST00000489758 NUDT3O95989 172 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 S100A8P05109 93 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 RAB4AP20338 218 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 AMN1Q8IY45 258 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 YPEL4Q96NS1 127 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
CLIC4-203ENST00000489758 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
CLIC4-203ENST00000489758 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
CLIC4-203ENST00000489758 TRBV10-1A0A0K0K1A3 114 aa11.16□□□□□ -0.62
CLIC4-203ENST00000489758 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
CLIC4-203ENST00000489758 ELOBQ15370 118 aa11.15□□□□□ -0.62
CLIC4-203ENST00000489758 MRPL23Q16540 153 aaKnown RBP11.15□□□□□ -0.62
CLIC4-203ENST00000489758 RASL11AQ6T310 242 aa11.15□□□□□ -0.62
CLIC4-203ENST00000489758 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.62
CLIC4-203ENST00000489758 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 GAGE1Q13065 139 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 GAGE4Q13068 117 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 GAGE5Q13069 117 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 GAGE13Q4V321 117 aa11.14□□□□□ -0.63
CLIC4-203ENST00000489758 CBLN2Q8IUK8 224 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms