RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 IGHV3-53P01767 116 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 CRYGDP07320 174 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 HOXA5P20719 270 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 TCTAP57738 103 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 FHL2Q14192 279 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 TWIST1Q15672 202 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 UFSP1Q6NVU6 142 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 JPT2Q9H910 190 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 PRO0255Q9UI72 69 aa10.35□□□□□ -0.75
HLA-F-223ENST00000465459 A0A1B0GW15 77 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 RIGQ13278 110 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 SMIM15Q7Z3B0 74 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 MSRB1Q9NZV6 116 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
HLA-F-223ENST00000465459 GATA1P15976 413 aaPredicted RBP10.33□□□□□ -0.76
HLA-F-223ENST00000465459 SSTP61278 116 aa10.33□□□□□ -0.76
HLA-F-223ENST00000465459 SAMD10Q9BYL1 202 aa10.33□□□□□ -0.76
HLA-F-223ENST00000465459 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
HLA-F-223ENST00000465459 NACAE9PAV3 2078 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 TRAV9-1A0A075B6T8 112 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 TRBV6-4A0A1B0GX49 114 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 S100A8P05109 93 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 CRYBA4P53673 196 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 KCNIP4Q6PIL6 250 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 C14orf178Q8N769 122 aaPredicted RBP10.32□□□□□ -0.76
HLA-F-223ENST00000465459 RPS10P5Q9NQ39 176 aa10.32□□□□□ -0.76
HLA-F-223ENST00000465459 TRAV26-1A0A087WT03 109 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 A0A087WWL8 130 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 PAX4O43316 350 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 EVI2AP22794 236 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 S100PP25815 95 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 RAB4BP61018 213 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 TMEM88Q6PEY1 159 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 C15orf53Q8NAA6 179 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 BTF3L4Q96K17 158 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
HLA-F-223ENST00000465459 IGHV3-73A0A0B4J1V6 119 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 IGLL5B9A064 214 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
HLA-F-223ENST00000465459 LINC00315P59091 139 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 FRZBQ92765 325 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 TMEM191AQ9H0A3 160 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
HLA-F-223ENST00000465459 A0A1B0GXF2 115 aa10.29□□□□□ -0.76
HLA-F-223ENST00000465459 HBBP68871 147 aa10.29□□□□□ -0.76
HLA-F-223ENST00000465459 RHOHQ15669 191 aa10.29□□□□□ -0.76
HLA-F-223ENST00000465459 SLC25A29Q8N8R3 303 aa10.29□□□□□ -0.76
HLA-F-223ENST00000465459 PRADC1Q9BSG0 188 aa10.29□□□□□ -0.76
HLA-F-223ENST00000465459 TRBV10-1A0A0K0K1A3 114 aa10.28□□□□□ -0.76
HLA-F-223ENST00000465459 ZNF56Q15929 161 aa10.28□□□□□ -0.76
HLA-F-223ENST00000465459 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
HLA-F-223ENST00000465459 A0A0J9YY99 117 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 F5H697 171 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 H7C1H1 209 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 K7EQD1 137 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 MRPL23Q16540 153 aaKnown RBP10.27□□□□□ -0.77
HLA-F-223ENST00000465459 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
HLA-F-223ENST00000465459 Q6ZSN1 163 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 SH2D6Q7Z4S9 175 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 GATD1Q8NB37 220 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 APLNQ9ULZ1 77 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 ICOSQ9Y6W8 199 aa10.27□□□□□ -0.77
HLA-F-223ENST00000465459 MGPP08493 103 aa10.26□□□□□ -0.77
HLA-F-223ENST00000465459 CAMPP49913 170 aa10.26□□□□□ -0.77
HLA-F-223ENST00000465459 GYPEP15421 78 aa10.25□□□□□ -0.77
HLA-F-223ENST00000465459 M0QY20 66 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 NUDT3O95989 172 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 COX19Q49B96 90 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 FAM104BQ5XKR9 115 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 SUMO4Q6EEV6 95 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 ATRAIDQ6UW56 229 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
HLA-F-223ENST00000465459 A0A096LPF7 62 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 RAB4AP20338 218 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 SRIP30626 198 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 RPL36AP83881 106 aaKnown RBP10.23□□□□□ -0.77
HLA-F-223ENST00000465459 RPL36ALQ969Q0 106 aaKnown RBP10.23□□□□□ -0.77
HLA-F-223ENST00000465459 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 DNAJC30Q96LL9 226 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 SMCO4Q9NRQ5 59 aa10.23□□□□□ -0.77
HLA-F-223ENST00000465459 CSMD3Q7Z407 3707 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 TRBV24-1A0A075B6N3 115 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 S100A1P23297 94 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 NEGR1Q7Z3B1 354 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 AMN1Q8IY45 258 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 RNF185Q96GF1 192 aa10.22□□□□□ -0.77
HLA-F-223ENST00000465459 TRBV7-3A0A075B6L6 115 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 LOC100131303A0A0U1RQF7 123 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 PPP1R17O96001 155 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 LINC00694P0DN24 101 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 ELOBQ15370 118 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
HLA-F-223ENST00000465459 PPBPP02775 128 aa10.2□□□□□ -0.78
HLA-F-223ENST00000465459 P0DMU3 169 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms