RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 HHLA3Q9XRX5 114 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 IGHV1-58A0A0C4DH39 117 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 NXPH4O95158 308 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 Q9HAA7 133 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 DENND4CQ5VZ89 1909 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 COL4A3Q01955 1670 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 BUB3O43684 328 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3-30P01768 117 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3-30-5P0DP03 117 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 DEFB124Q8NES8 71 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 IGKV1D-37A0A075B6S9 117 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3-38A0A0C4DH36 116 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 Q0VFX4 171 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 FANCD2OSQ96PS1 177 aa7.98□□□□□ -1.13
LIN54-202ENST00000442461 FAM223BA6NKX1 122 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 K7EIM0 57 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 FAM223AQ8IWN6 122 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 USMG5Q96IX5 58 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 PRR14LQ5THK1 2151 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 CCL21O00585 134 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 PROP1O75360 226 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 IGHV1-69P01742 117 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 UBE2D1P51668 147 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 UBE2D3P61077 147 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 UBE2D2P62837 147 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 SS18Q15532 418 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 SPINK13Q1W4C9 94 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 THADAQ6YHU6 1953 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 IGHV3-53P01767 116 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 PF4P02776 101 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 STHQ8IWL8 128 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 KLK9Q9UKQ9 250 aa7.97□□□□□ -1.13
LIN54-202ENST00000442461 KLK5Q9Y337 293 aaPredicted RBP7.97□□□□□ -1.13
LIN54-202ENST00000442461 RNF138Q8WVD3 245 aa7.96□□□□□ -1.13
LIN54-202ENST00000442461 LST1O00453 97 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 TIMM17BO60830 172 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
LIN54-202ENST00000442461 EP400Q96L91 3159 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 NDUFC1O43677 76 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 Q8N7P7 452 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 MDFICQ9P1T7 246 aa7.96□□□□□ -1.14
LIN54-202ENST00000442461 LOXP28300 417 aaPredicted RBP7.95□□□□□ -1.14
LIN54-202ENST00000442461 MYCNOSP40205 109 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 ZNRF2Q8NHG8 242 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 LINC01560Q8TB33 94 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 MSRB2Q9Y3D2 182 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 LTBP1Q14766 1721 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 OVOL3O00110 214 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 PRO0628Q9UI54 55 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.95□□□□□ -1.14
LIN54-202ENST00000442461 IGKV2-29A2NJV5 120 aaPredicted RBP7.95□□□□□ -1.14
LIN54-202ENST00000442461 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
LIN54-202ENST00000442461 HIST2H2BCQ6DN03 193 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 HIST2H2BDQ6DRA6 164 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 WFDC9Q8NEX5 89 aa7.95□□□□□ -1.14
LIN54-202ENST00000442461 IGHV3-16A0A0C4DH30 117 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 PRAC2D3DTV9 90 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 E7EUB6 86 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 ZNF672Q499Z4 452 aaPredicted RBP7.94□□□□□ -1.14
LIN54-202ENST00000442461 OPRPNQ99935 248 aaPredicted RBP7.94□□□□□ -1.14
LIN54-202ENST00000442461 TANC2Q9HCD6 1990 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 TRAV12-2A0A075B6T6 113 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 WI2-2373I1.2A0A1W2PRP0 233 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 H7C423 109 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 SEC61GP60059 68 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 C20orf203Q8NBC4 194 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 SPTSSBQ8NFR3 76 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 SERP1Q9Y6X1 66 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 PLXNB3Q9ULL4 1909 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 TEX22C9J3V5 150 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 ATP6V0E1O15342 81 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
LIN54-202ENST00000442461 TNS1Q9HBL0 1735 aaKnown RBP7.93□□□□□ -1.14
LIN54-202ENST00000442461 ACACAQ13085 2346 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.93□□□□□ -1.14
LIN54-202ENST00000442461 RNF185Q96GF1 192 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 AGRNO00468 2067 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 TMEM256-PLSCR3K7ERE1 68 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 CRIP1P50238 77 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 AJUBAQ96IF1 538 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 WNK1Q9H4A3 2382 aa7.93□□□□□ -1.14
LIN54-202ENST00000442461 MRPS36P82909 103 aaKnown RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 EIF4EBP1Q13541 118 aaPredicted RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 ZNF22P17026 224 aaPredicted RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 FUSP35637 526 aaKnown RBP eCLIP7.92□□□□□ -1.14
LIN54-202ENST00000442461 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 NDUFA4O00483 81 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 MDS2Q8NDY4 140 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 MBD3L2Q8NHZ7 208 aaPredicted RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 IGLV3-9A0A075B6K5 115 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 F8WEM9 126 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 G3V318 75 aa7.92□□□□□ -1.14
LIN54-202ENST00000442461 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 RPS28P62857 69 aaKnown RBP7.92□□□□□ -1.14
LIN54-202ENST00000442461 NSUN5P1Q3KNT7 163 aa7.91□□□□□ -1.14
LIN54-202ENST00000442461 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
LIN54-202ENST00000442461 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
LIN54-202ENST00000442461 PDE6GP18545 87 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms