RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 MRPL54Q6P161 138 aaKnown RBP11.07□□□□□ -0.64
DDX55-203ENST00000421670 WDR73Q6P4I2 378 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
DDX55-203ENST00000421670 PHLDA1Q8WV24 401 aaPredicted RBP11.07□□□□□ -0.64
DDX55-203ENST00000421670 LYSTQ99698 3801 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 TMEM242Q9NWH2 141 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 URGCP-MRPS24S4R325 110 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 TRAV10A0A0B4J240 114 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 F5H768 121 aa11.07□□□□□ -0.64
DDX55-203ENST00000421670 CRYGDP07320 174 aa11.06□□□□□ -0.64
DDX55-203ENST00000421670 EVI2AP22794 236 aa11.06□□□□□ -0.64
DDX55-203ENST00000421670 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 TRGC1P0CF51 173 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 RIGQ13278 110 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 FHL2Q14192 279 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 UFSP1Q6NVU6 142 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 KCNIP4Q6PIL6 250 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 MUC7Q8TAX7 377 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 IMMP2LQ96T52 175 aa11.05□□□□□ -0.64
DDX55-203ENST00000421670 PLECQ15149 4684 aaKnown RBP11.05□□□□□ -0.64
DDX55-203ENST00000421670 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
DDX55-203ENST00000421670 CAMPP49913 170 aa11.04□□□□□ -0.64
DDX55-203ENST00000421670 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
DDX55-203ENST00000421670 KIF25-AS1Q9Y6Z4 181 aa11.04□□□□□ -0.64
DDX55-203ENST00000421670 RHODO00212 210 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 MGPP08493 103 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 S100PP25815 95 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 ZNF56Q15929 161 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 ZFP2Q6ZN57 461 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 A0A0J9YY99 117 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 TMEM88Q6PEY1 159 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 Q6ZSN1 163 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
DDX55-203ENST00000421670 GATA1P15976 413 aaPredicted RBP11.02□□□□□ -0.65
DDX55-203ENST00000421670 LINC00315P59091 139 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 HBBP68871 147 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 SMIM15Q7Z3B0 74 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 ATP5L2Q7Z4Y8 100 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 CBLN2Q8IUK8 224 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 HHLA3Q9XRX5 114 aa11.02□□□□□ -0.65
DDX55-203ENST00000421670 NUPR2A6NF83 97 aa11.01□□□□□ -0.65
DDX55-203ENST00000421670 CRYBA4P53673 196 aa11.01□□□□□ -0.65
DDX55-203ENST00000421670 SLC25A29Q8N8R3 303 aa11.01□□□□□ -0.65
DDX55-203ENST00000421670 PRO0255Q9UI72 69 aa11.01□□□□□ -0.65
DDX55-203ENST00000421670 A0A1B0GW15 77 aa11□□□□□ -0.65
DDX55-203ENST00000421670 IGLL5B9A064 214 aa11□□□□□ -0.65
DDX55-203ENST00000421670 F5H697 171 aa11□□□□□ -0.65
DDX55-203ENST00000421670 CIDEAO60543 219 aa11□□□□□ -0.65
DDX55-203ENST00000421670 CEMP1Q6PRD7 247 aaPredicted RBP11□□□□□ -0.65
DDX55-203ENST00000421670 TMEM191AQ9H0A3 160 aa11□□□□□ -0.65
DDX55-203ENST00000421670 TRAV9-1A0A075B6T8 112 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 P0DMU3 169 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 ELOBQ15370 118 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 VSIG2Q96IQ7 327 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 TGIF2-C20orf24A0A0A6YYL0 155 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 TRAV26-2A0A0B4J265 109 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 LOC100131303A0A0U1RQF7 123 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 K7EQD1 137 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 PAX4O43316 350 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 SCO1O75880 301 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 RAB4BP61018 213 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 Q9UF83 564 aa10.99□□□□□ -0.65
DDX55-203ENST00000421670 TRBV6-4A0A1B0GX49 114 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 S100A8P05109 93 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 S100A1P23297 94 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 SLAQ13239 276 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 RHOHQ15669 191 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
DDX55-203ENST00000421670 GATD1Q8NB37 220 aa10.97□□□□□ -0.65
DDX55-203ENST00000421670 RNF185Q96GF1 192 aa10.97□□□□□ -0.65
DDX55-203ENST00000421670 GYPEP15421 78 aa10.96□□□□□ -0.65
DDX55-203ENST00000421670 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
DDX55-203ENST00000421670 KLK5Q9Y337 293 aaPredicted RBP10.96□□□□□ -0.65
DDX55-203ENST00000421670 NUDT3O95989 172 aa10.95□□□□□ -0.66
DDX55-203ENST00000421670 RAB4AP20338 218 aa10.95□□□□□ -0.66
DDX55-203ENST00000421670 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
DDX55-203ENST00000421670 FAM104BQ5XKR9 115 aa10.95□□□□□ -0.66
DDX55-203ENST00000421670 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
DDX55-203ENST00000421670 M0QY20 66 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 NCR2O95944 276 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 MRPL51Q4U2R6 128 aaKnown RBP10.94□□□□□ -0.66
DDX55-203ENST00000421670 RASL11AQ6T310 242 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 FAM210BQ96KR6 192 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 TRBV24-1A0A075B6N3 115 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 A0A096LPF7 62 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 H3BNG1 76 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 ICOSQ9Y6W8 199 aa10.94□□□□□ -0.66
DDX55-203ENST00000421670 GAGE12JA6NER3 117 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 H7C1H1 209 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms