RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
SCARB1-202ENST00000339570 TSPEAR-AS2P59090 65 aa12.16□□□□□ -0.46
SCARB1-202ENST00000339570 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
SCARB1-202ENST00000339570 LINC01546A6NGU7 62 aa12.15□□□□□ -0.46
SCARB1-202ENST00000339570 IGHV4-38-2P0DP08 117 aa12.15□□□□□ -0.46
SCARB1-202ENST00000339570 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
SCARB1-202ENST00000339570 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
SCARB1-202ENST00000339570 PRM2P04554 102 aa12.15□□□□□ -0.46
SCARB1-202ENST00000339570 TRAV2A0A0B4J234 112 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 CKS1BP61024 79 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 Q1RN00 199 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 C10orf99Q6UWK7 81 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 ZNF580Q9UK33 172 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 SMCPP49901 116 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-202ENST00000339570 DLX4Q92988 240 aaPredicted RBP12.14□□□□□ -0.47
SCARB1-202ENST00000339570 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 HIST2H2BDQ6DRA6 164 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 SUMO4Q6EEV6 95 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
SCARB1-202ENST00000339570 MT-ATP8P03928 68 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 CRYGDP07320 174 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 LMO4P61968 165 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 TSHBP01222 138 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 PRO0461Q9UI25 63 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 PSMG4Q5JS54 123 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 MDFICQ9P1T7 246 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
SCARB1-202ENST00000339570 TMEM190Q8WZ59 177 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 TMEM238LA0A1B0GVL6 79 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 A6NJY4 79 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 TCL1BO95988 128 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 TAL2Q16559 108 aa12.12□□□□□ -0.47
SCARB1-202ENST00000339570 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 FOXI1Q12951 378 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 C1orf122Q6ZSJ8 110 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 TRPT1Q86TN4 253 aaKnown RBP12.11□□□□□ -0.47
SCARB1-202ENST00000339570 ITLN2Q8WWU7 325 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-202ENST00000339570 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 SPINK13Q1W4C9 94 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 PRSS2P07478 247 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 HERVK_113P61574 105 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
SCARB1-202ENST00000339570 CIDEAO60543 219 aa12.1□□□□□ -0.47
SCARB1-202ENST00000339570 LGALS3P17931 250 aaKnown RBP12.1□□□□□ -0.47
SCARB1-202ENST00000339570 FHL3Q13643 280 aa12.1□□□□□ -0.47
SCARB1-202ENST00000339570 CEMP1Q6PRD7 247 aaPredicted RBP12.1□□□□□ -0.47
SCARB1-202ENST00000339570 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
SCARB1-202ENST00000339570 OVOL1O14753 267 aa12.1□□□□□ -0.47
SCARB1-202ENST00000339570 IGHV4-39P01824 125 aa12.1□□□□□ -0.47
SCARB1-202ENST00000339570 IGLV4-69A0A075B6H9 119 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 U3KQE9 123 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 A0A1B0GV72 72 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 P0DMU3 169 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 CCDC168Q8NDH2 2452 aa12.09□□□□□ -0.47
SCARB1-202ENST00000339570 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 A0A0J9YY99 117 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 CRIP2P52943 208 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-202ENST00000339570 FBXL19-AS1Q494R0 122 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 KLRB1Q12918 225 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 PMVKQ15126 192 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 CFAP126Q5VTH2 177 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 NDUFA11Q86Y39 141 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 SPXQ9BT56 116 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 CFC1BP0CG36 223 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 CFC1P0CG37 223 aa12.08□□□□□ -0.48
SCARB1-202ENST00000339570 C9JAW5 83 aa12.07□□□□□ -0.48
SCARB1-202ENST00000339570 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
SCARB1-202ENST00000339570 CFAP46Q8IYW2 2715 aa12.07□□□□□ -0.48
SCARB1-202ENST00000339570 LRRK2Q5S007 2527 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 FBN2P35556 2912 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 A4D1N5 150 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 XGP55808 180 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
SCARB1-202ENST00000339570 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 A8MZ25 164 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 J3QQQ9 107 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 PKD1L2Q7Z442 2459 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 PROK1P58294 105 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 NRGNQ92686 78 aa12.06□□□□□ -0.48
SCARB1-202ENST00000339570 NDUFA4O00483 81 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
SCARB1-202ENST00000339570 IGHV1-69DA0A0B4J2H0 117 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 FAM223BA6NKX1 122 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 IGHV1-69P01742 117 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 COX6B1P14854 86 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 FAM223AQ8IWN6 122 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
SCARB1-202ENST00000339570 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms