RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 GTSF1Q8WW33 167 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 CNOT1A5YKK6 2376 aaKnown RBP8.91□□□□□ -0.98
LAMA4-201ENST00000230538 DOCK10Q96BY6 2186 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 NRGNQ92686 78 aa8.91□□□□□ -0.98
LAMA4-201ENST00000230538 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 ADORA2A-AS1P86434 159 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 GVINP1Q7Z2Y8 2422 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 NREPQ16612 68 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 TEX22C9J3V5 150 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 WFDC9Q8NEX5 89 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 C4orf3Q8WVX3 66 aa8.9□□□□□ -0.98
LAMA4-201ENST00000230538 IGLV2-14P01704 120 aa8.9□□□□□ -0.99
LAMA4-201ENST00000230538 DOPEY2Q9Y3R5 2298 aa8.9□□□□□ -0.99
LAMA4-201ENST00000230538 K7EMT4 169 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 FAM167A-AS1Q96KT0 104 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
LAMA4-201ENST00000230538 IGF2-ASQ6U949 168 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 B5MCH6 92 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 MP68P56378 58 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 Q6ZSR3 168 aa8.89□□□□□ -0.99
LAMA4-201ENST00000230538 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 PSMB8P28062 276 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 ACACAQ13085 2346 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 ZFP36P26651 326 aaKnown RBP8.88□□□□□ -0.99
LAMA4-201ENST00000230538 TMEM61Q8N0U2 210 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 DEFB4AO15263 64 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
LAMA4-201ENST00000230538 RNF138Q8WVD3 245 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 A0A1B0GX51 115 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 DEFB135Q30KP9 77 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 MYCNOSP40205 109 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 GPHB5Q86YW7 130 aa8.88□□□□□ -0.99
LAMA4-201ENST00000230538 PKDREJQ9NTG1 2253 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 SEM1Q6ZVN7 128 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 CXCL5P42830 114 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 ODF3L1Q8IXM7 274 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 Q8N7P7 452 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 C11orf86A6NJI1 115 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 E7EUB6 86 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 LGALS9O00182 355 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 FXYD2P54710 66 aa8.87□□□□□ -0.99
LAMA4-201ENST00000230538 SPAG11BQ08648 103 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 CACNA1BQ00975 2339 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 E9PLD3 99 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 CTRLP40313 264 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 ATOX1O00244 68 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 DIRC1Q969H9 104 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 KIAA1549LQ6ZVL6 1849 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 LECT2O14960 151 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 DEFB1P60022 68 aa8.86□□□□□ -0.99
LAMA4-201ENST00000230538 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 DAZAP2Q15038 168 aaPredicted RBP8.85□□□□□ -0.99
LAMA4-201ENST00000230538 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 ROS1P08922 2347 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 C14orf132Q9NPU4 83 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 FRMD6-AS1P0C7T7 363 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 CLEC2BQ92478 149 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 OBSL1O75147 1896 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 NOTCH4Q99466 2003 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 JMJD7-PLA2G4BH0Y9G9 81 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 TEN1Q86WV5 123 aa8.85□□□□□ -0.99
LAMA4-201ENST00000230538 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 FANCD2OSQ96PS1 177 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 LYPD6Q86Y78 171 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 KLK5Q9Y337 293 aaPredicted RBP8.84□□□□□ -0.99
LAMA4-201ENST00000230538 SPTBN2O15020 2390 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 IGLV1-47P01700 117 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 MDFICQ9P1T7 246 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 ABCA1O95477 2261 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
LAMA4-201ENST00000230538 TMEM263Q8WUH6 116 aaKnown RBP8.84□□□□□ -0.99
LAMA4-201ENST00000230538 ABCA4P78363 2273 aa8.84□□□□□ -1
LAMA4-201ENST00000230538 TNRC6BQ9UPQ9 1833 aaKnown RBP8.84□□□□□ -1
LAMA4-201ENST00000230538 WNK2Q9Y3S1 2297 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 TRBV12-3P01733 135 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 SIRPDQ9H106 197 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 COL4A3Q01955 1670 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 IGHV1-58A0A0C4DH39 117 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 WFDC2Q14508 124 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 SMAD5-AS1Q9Y6J3 95 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 TRBV6-1A0A0K0K1D8 114 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 TRBV10-2A0A0K0K1G8 114 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 UNQ9165/PRO28630Q6UXU0 137 aa8.83□□□□□ -1
LAMA4-201ENST00000230538 PLA2G5P39877 138 aa8.82□□□□□ -1
LAMA4-201ENST00000230538 CACNA1GO43497 2377 aa8.82□□□□□ -1
LAMA4-201ENST00000230538 TNRC6AQ8NDV7 1962 aaKnown RBP8.82□□□□□ -1
LAMA4-201ENST00000230538 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
LAMA4-201ENST00000230538 A0A0J9YX75 114 aa8.81□□□□□ -1
LAMA4-201ENST00000230538 TMEM256-PLSCR3K7ERE1 68 aa8.81□□□□□ -1
LAMA4-201ENST00000230538 ODF1Q14990 250 aa8.81□□□□□ -1
LAMA4-201ENST00000230538 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
LAMA4-201ENST00000230538 NCOR1O75376 2440 aa8.81□□□□□ -1
LAMA4-201ENST00000230538 TAX1BP3O14907 124 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms