RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
LEMD3-206ENST00000545026 BDP1A6H8Y1 2624 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 ARHGEF10O15013 1369 aa0.82□□□□□ -2.28
LEMD3-206ENST00000545026 RREB1Q92766 1687 aa0.81□□□□□ -2.28
LEMD3-206ENST00000545026 DLEC1Q9Y238 1755 aa0.81□□□□□ -2.28
LEMD3-206ENST00000545026 ESPL1Q14674 2120 aa0.81□□□□□ -2.28
LEMD3-206ENST00000545026 TMEM14BQ9NUH8 114 aa0.81□□□□□ -2.28
LEMD3-206ENST00000545026 NOP16Q9Y3C1 178 aaKnown RBP0.81□□□□□ -2.28
LEMD3-206ENST00000545026 AFDNP55196 1824 aaKnown RBP0.8□□□□□ -2.28
LEMD3-206ENST00000545026 SYNJ1O43426 1573 aa0.8□□□□□ -2.28
LEMD3-206ENST00000545026 YPEL1O60688 119 aa0.8□□□□□ -2.28
LEMD3-206ENST00000545026 ATP11AUNQ6ZP68 121 aa0.8□□□□□ -2.28
LEMD3-206ENST00000545026 DYNLRB2Q8TF09 96 aa0.8□□□□□ -2.28
LEMD3-206ENST00000545026 ABCA4P78363 2273 aa0.8□□□□□ -2.28
LEMD3-206ENST00000545026 KCPQ6ZWJ8 1503 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 HIST1H1AQ02539 215 aaPredicted RBP0.79□□□□□ -2.28
LEMD3-206ENST00000545026 VPS25Q9BRG1 176 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 KRTAP2-1Q9BYU5 128 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 GSKIPQ9P0R6 139 aa0.79□□□□□ -2.28
LEMD3-206ENST00000545026 A0A096LNT2 108 aa0.78□□□□□ -2.28
LEMD3-206ENST00000545026 TEX49A0A1B0GTD5 131 aa0.78□□□□□ -2.28
LEMD3-206ENST00000545026 M0R2P5 195 aa0.78□□□□□ -2.28
LEMD3-206ENST00000545026 CKS1BP61024 79 aa0.78□□□□□ -2.28
LEMD3-206ENST00000545026 ALX1Q15699 326 aa0.77□□□□□ -2.29
LEMD3-206ENST00000545026 CACNA1EQ15878 2313 aa0.76□□□□□ -2.29
LEMD3-206ENST00000545026 ABCA1O95477 2261 aa0.76□□□□□ -2.29
LEMD3-206ENST00000545026 APOC1P02654 83 aa0.76□□□□□ -2.29
LEMD3-206ENST00000545026 SLC25A6P12236 298 aa0.76□□□□□ -2.29
LEMD3-206ENST00000545026 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 OVOS2A0A0J9YW53 1432 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 OVOS2Q6IE36 1432 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 LOC105371267A0A1B0GV96 52 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 J3QLW9 94 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 MPC1LP0DKB6 136 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 MMGT1Q8N4V1 131 aa0.75□□□□□ -2.29
LEMD3-206ENST00000545026 JMJD1CQ15652 2540 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 TRBV20-1A0A075B6N2 111 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 IGLC6P0CF74 106 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 PYYP10082 97 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 NCS1P62166 190 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 OR2T2Q6IF00 324 aa0.74□□□□□ -2.29
LEMD3-206ENST00000545026 PTPRMP28827 1452 aa0.73□□□□□ -2.29
LEMD3-206ENST00000545026 ERCC6Q03468 1493 aa0.73□□□□□ -2.29
LEMD3-206ENST00000545026 TMEM141Q96I45 108 aa0.73□□□□□ -2.29
LEMD3-206ENST00000545026 FAM236AA0A1B0GUQ0 79 aa0.72□□□□□ -2.29
LEMD3-206ENST00000545026 FAM236BA0A1B0GV22 79 aa0.72□□□□□ -2.29
LEMD3-206ENST00000545026 NDUFA11Q86Y39 141 aa0.72□□□□□ -2.29
LEMD3-206ENST00000545026 LZICQ8WZA0 190 aa0.72□□□□□ -2.29
LEMD3-206ENST00000545026 SMIM3Q9BZL3 60 aa0.72□□□□□ -2.29
LEMD3-206ENST00000545026 PLXNA2O75051 1894 aa0.71□□□□□ -2.3
LEMD3-206ENST00000545026 COA4Q9NYJ1 87 aa0.71□□□□□ -2.3
LEMD3-206ENST00000545026 DISP2A7MBM2 1401 aa0.71□□□□□ -2.3
LEMD3-206ENST00000545026 TRAV12-2A0A075B6T6 113 aa0.7□□□□□ -2.3
LEMD3-206ENST00000545026 TSPAN19P0C672 248 aa0.7□□□□□ -2.3
LEMD3-206ENST00000545026 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
LEMD3-206ENST00000545026 DSCR8Q96T75 97 aa0.7□□□□□ -2.3
LEMD3-206ENST00000545026 TCRBV3S1A0A5B6 114 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 LINC00694P0DN24 101 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
LEMD3-206ENST00000545026 PPP1R1CQ8WVI7 109 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 BET1LQ9NYM9 111 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 ERG28Q9UKR5 140 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
LEMD3-206ENST00000545026 ZNF670-ZNF695F2Z2N8 137 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 M0R129 80 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 EMX2Q04743 252 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 TSKUQ8WUA8 353 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 MAFIPQ8WZ33 124 aa0.68□□□□□ -2.3
LEMD3-206ENST00000545026 PRG4Q92954 1404 aaPredicted RBP0.67□□□□□ -2.3
LEMD3-206ENST00000545026 PHGR1C9JFL3 82 aa0.67□□□□□ -2.3
LEMD3-206ENST00000545026 LINC01545Q5VT33 79 aa0.67□□□□□ -2.3
LEMD3-206ENST00000545026 PIEZO1Q92508 2521 aa0.67□□□□□ -2.3
LEMD3-206ENST00000545026 CEP152O94986 1710 aa0.67□□□□□ -2.3
LEMD3-206ENST00000545026 RBBP6Q7Z6E9 1792 aaKnown RBP0.66□□□□□ -2.3
LEMD3-206ENST00000545026 CYP2G1PQ6ZSU1 146 aa0.66□□□□□ -2.3
LEMD3-206ENST00000545026 CTAGE3PQ8IX95 158 aa0.66□□□□□ -2.3
LEMD3-206ENST00000545026 SAR1AQ9NR31 198 aa0.66□□□□□ -2.3
LEMD3-206ENST00000545026 M0R2Z0 102 aa0.65□□□□□ -2.31
LEMD3-206ENST00000545026 NPC2P61916 151 aa0.65□□□□□ -2.31
LEMD3-206ENST00000545026 MIC13Q5XKP0 118 aa0.65□□□□□ -2.31
LEMD3-206ENST00000545026 MED13LQ71F56 2210 aa0.65□□□□□ -2.31
LEMD3-206ENST00000545026 TANC1Q9C0D5 1861 aa0.65□□□□□ -2.31
LEMD3-206ENST00000545026 NCR2O95944 276 aa0.64□□□□□ -2.31
LEMD3-206ENST00000545026 SMIM21Q3B7S5 101 aa0.64□□□□□ -2.31
LEMD3-206ENST00000545026 VSTM2AQ8TAG5 236 aa0.64□□□□□ -2.31
LEMD3-206ENST00000545026 NDUFA12Q9UI09 145 aa0.64□□□□□ -2.31
LEMD3-206ENST00000545026 ZNF142P52746 1687 aaPredicted RBP0.64□□□□□ -2.31
LEMD3-206ENST00000545026 CDK5RAP2Q96SN8 1893 aa0.64□□□□□ -2.31
LEMD3-206ENST00000545026 J3QR89 54 aa0.63□□□□□ -2.31
LEMD3-206ENST00000545026 ANP32BQ92688 251 aaKnown RBP0.63□□□□□ -2.31
LEMD3-206ENST00000545026 COPZ2Q9P299 210 aa0.63□□□□□ -2.31
LEMD3-206ENST00000545026 MAP2P11137 1827 aaKnown RBP0.63□□□□□ -2.31
LEMD3-206ENST00000545026 A0A087WTM6 91 aa0.62□□□□□ -2.31
LEMD3-206ENST00000545026 MCRIP1C9JLW8 97 aa0.62□□□□□ -2.31
LEMD3-206ENST00000545026 PITX3O75364 302 aa0.62□□□□□ -2.31
LEMD3-206ENST00000545026 CCL3L1P16619 93 aa0.62□□□□□ -2.31
LEMD3-206ENST00000545026 CACNA1HO95180 2353 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms