RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 PRO0461Q9UI25 63 aa1.3□□□□□ -2.2
SCARNA11.3-201ENST00000517276 KLK9Q9UKQ9 250 aa1.3□□□□□ -2.2
SCARNA11.3-201ENST00000517276 ANK1P16157 1881 aa1.3□□□□□ -2.2
SCARNA11.3-201ENST00000517276 PCDH15Q96QU1 1955 aa1.3□□□□□ -2.2
SCARNA11.3-201ENST00000517276 CECR2Q9BXF3 1484 aa1.3□□□□□ -2.2
SCARNA11.3-201ENST00000517276 MCM3APO60318 1980 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 MDC1Q14676 2089 aaKnown RBP1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 CXorf51AA0A1B0GTR3 108 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 TCRBV3S1A0A5B6 114 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 GYPBP06028 91 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 SNCAP37840 140 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 C9orf116Q5BN46 136 aaPredicted RBP1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 COL5A1-AS1Q5SY13 56 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 RPL7L1Q6DKI1 246 aaKnown RBP1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 C10orf82Q8WW14 230 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 ZNF625Q96I27 306 aaPredicted RBP1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 WFDC10AQ9H1F0 79 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 MRPL36Q9P0J6 103 aaKnown RBP1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 ALPK2Q86TB3 2170 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 ZNF609O15014 1411 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 PTPRMP28827 1452 aa1.29□□□□□ -2.2
SCARNA11.3-201ENST00000517276 PTPRFP10586 1907 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 IGKV3-7A0A075B6H7 116 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 RBAKDNA6NC62 111 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 FAM24AA6NFZ4 105 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 KRTAP10-1P60331 282 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 IFI27L1Q96BM0 104 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 ODF3Q96PU9 254 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 SPANXDQ9BXN6 97 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 DPH3P1Q9H4G8 78 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 MRPL35Q9NZE8 188 aaKnown RBP1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 BCORL1Q5H9F3 1711 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 RBBP6Q7Z6E9 1792 aaKnown RBP1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 KIAA1549LQ6ZVL6 1849 aa1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 TNRC6AQ8NDV7 1962 aaKnown RBP1.28□□□□□ -2.2
SCARNA11.3-201ENST00000517276 LAMB2P55268 1798 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 ROBO1Q9Y6N7 1651 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 NRKQ7Z2Y5 1582 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRAV23DV6A0A075B6W5 121 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRAV2A0A0B4J234 112 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 NUPR2A6NF83 97 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 A6NIN4 97 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 JMJD7-PLA2G4BH0Y9G9 81 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 NUPR1O60356 82 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 IGLV3-1P01715 115 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 MT-ATP8P03928 68 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 IGKV4-1P06312 121 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 IL9P15248 144 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CBLN1P23435 193 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 UBA52P62987 128 aaKnown RBP1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 LCE1EQ5T753 118 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 C5orf38Q86SI9 138 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 PPDPFLQ8WWR9 84 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CACNA1GO43497 2377 aa1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 SNRNP200O75643 2136 aaKnown RBP1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CHD3Q12873 2000 aaKnown RBP1.27□□□□□ -2.21
SCARNA11.3-201ENST00000517276 MUC22E2RYF6 1773 aaPredicted RBP1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRBV10-1A0A0K0K1A3 114 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 PVALEFA0A1B0GWK0 134 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TMEM262E9PQX1 116 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 J3QRE1 110 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 MPV17LQ2QL34 196 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 KRTAP13-4Q3LI77 160 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 C12orf73Q69YU5 71 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 SBSPONQ8IVN8 264 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 AQP10Q96PS8 301 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 ATG5Q9H1Y0 275 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TMEM106BQ9NUM4 274 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CR1P17927 2039 aa1.26□□□□□ -2.21
SCARNA11.3-201ENST00000517276 ARFGEF3Q5TH69 2177 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CPSF1Q10570 1443 aaKnown RBP1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 PLXNA2O75051 1894 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRGV2A0A075B6R0 118 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 A0A0J9YY99 117 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 LOC101927531A0A1B0GV80 90 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 HCG22E2RYF7 251 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 CCKP06307 115 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 KRTAP13-3Q3SY46 172 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 C4orf33Q8N1A6 199 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 LCE3DQ9BYE3 92 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 Q9H521 79 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TMEM14CQ9P0S9 112 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 MAPKBP1O60336 1514 aa1.25□□□□□ -2.21
SCARNA11.3-201ENST00000517276 RAPGEF2Q9Y4G8 1499 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 GBF1Q92538 1859 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 SDK1Q7Z5N4 2213 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 COL5A3P25940 1745 aaPredicted RBP1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRAV13-2A0A0B4J235 113 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TRBV10-3A0A0K0K1G6 114 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 UBE2L5PA0A1B0GUS4 154 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 PDE6GP18545 87 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 UBE2L3P68036 154 aaKnown RBP1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 DEFB103AP81534 67 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 LINC00299Q6ZSB3 139 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 COMMD6Q7Z4G1 85 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 C9orf62Q8N4C0 152 aa1.24□□□□□ -2.21
SCARNA11.3-201ENST00000517276 TSLPQ969D9 159 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms