RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 CLLU1Q5K131 121 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 FAM74A1Q5RGS3 127 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 HAGHLQ6PII5 290 aaPredicted RBP0.93□□□□□ -2.26
NCL-210ENST00000494618 TEX261Q6UWH6 196 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 TOMM20LQ6UXN7 152 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 SOSTDC1Q6X4U4 206 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 TCTE3Q8IZS6 198 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 C8orf59Q8N0T1 100 aaPredicted RBP0.93□□□□□ -2.26
NCL-210ENST00000494618 ACBD7Q8N6N7 88 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 LCN9Q8WX39 176 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 ZHX1-C8orf76Q96EF9 292 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 C14orf144Q96I85 54 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 PFDN5Q99471 154 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 CACYBPQ9HB71 228 aaKnown RBP0.93□□□□□ -2.26
NCL-210ENST00000494618 TMEM138Q9NPI0 162 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 SAR1AQ9NR31 198 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 MED29Q9NX70 200 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 COPZ2Q9P299 210 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 METTL1Q9UBP6 276 aaKnown RBP0.93□□□□□ -2.26
NCL-210ENST00000494618 ZFP30Q9Y2G7 519 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 U3KQ87 197 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 SLIT1O75093 1534 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 PTPRDP23468 1912 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 TMEM2Q9UHN6 1383 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 PTPRQQ9UMZ3 2332 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 RGPD2P0DJD1 1756 aa0.93□□□□□ -2.26
NCL-210ENST00000494618 INTS1Q8N201 2190 aaKnown RBP0.93□□□□□ -2.26
NCL-210ENST00000494618 COL1A1P02452 1464 aaPredicted RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 CPAMD8Q8IZJ3 1885 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 NUP210Q8TEM1 1887 aaPredicted RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 LRRC37A2A6NM11 1700 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 QSER1Q2KHR3 1735 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 DIP2CQ9Y2E4 1556 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 MYO7AQ13402 2215 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TNS3Q68CZ2 1445 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ZANQ9Y493 2812 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 PTPRSQ13332 1948 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 HIVEP3Q5T1R4 2406 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 A0A1B0GV90 55 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TCRBV4S1A1TA0A5B7 111 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 PRORSD1PA6NEY8 169 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ZNF736B4DX44 427 aaPredicted RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 C5orf58C9J3I9 102 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 HMGB3O15347 200 aaKnown RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 ARPC5O15511 151 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 GADD45GO95257 159 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 HLA-EP13747 358 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 RAB5CP51148 216 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TMBIM6P55061 237 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TCTAP57738 103 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 DNAJB13P59910 316 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 NCALDP61601 193 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 COPZ1P61923 177 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 PPP3R1P63098 170 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 SMIM21Q3B7S5 101 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 EIF5AL1Q6IS14 154 aaKnown RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 PDZD9Q8IXQ8 264 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 OR8J3Q8NGG0 315 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TP53RKQ96S44 253 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 SPANXDQ9BXN6 97 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 TMEM126AQ9H061 195 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 NIT2Q9NQR4 276 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 SCN3BQ9NY72 215 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 MED11Q9P086 117 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 GSKIPQ9P0R6 139 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 SSR3Q9UNL2 185 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 NFAT5O94916 1531 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ASXL1Q8IXJ9 1541 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ABCA13Q86UQ4 5058 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 BSNQ9UPA5 3926 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 CACNA1HO95180 2353 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 PHRF1Q9P1Y6 1649 aaKnown RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 MED13LQ71F56 2210 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ZFC3H1O60293 1989 aaKnown RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 DDX60Q8IY21 1712 aaKnown RBP0.92□□□□□ -2.26
NCL-210ENST00000494618 ARAP2Q8WZ64 1704 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 ERVK-7P63135 1459 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 BRWD1Q9NSI6 2320 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 DOCK11Q5JSL3 2073 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 HERC1Q15751 4861 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 WDFY3Q8IZQ1 3526 aa0.92□□□□□ -2.26
NCL-210ENST00000494618 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
NCL-210ENST00000494618 PLCH1Q4KWH8 1693 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 ZNF469Q96JG9 3925 aaPredicted RBP0.91□□□□□ -2.26
NCL-210ENST00000494618 ANKARQ7Z5J8 1434 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 DMDP11532 3685 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 SPENQ96T58 3664 aaKnown RBP0.91□□□□□ -2.26
NCL-210ENST00000494618 IQGAP3Q86VI3 1631 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 A0A096LPI6 279 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 BORCS7-ASMTA0A0B4J1R7 106 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 TRAV3A0A0B4J244 114 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 C20orf202A1L168 122 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 TMEM218A2RU14 115 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 M0R143 59 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 TAX1BP3O14907 124 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 NDUFB3O43676 98 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 TIMM17BO60830 172 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 IFNA1P01562 189 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 IL7P13232 177 aa0.91□□□□□ -2.26
NCL-210ENST00000494618 CMPK1P30085 196 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms