RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 LAMTOR3Q9UHA4 124 aa1.35□□□□□ -2.19
NF1-209ENST00000479536 SOX21Q9Y651 276 aaPredicted RBP1.35□□□□□ -2.19
NF1-209ENST00000479536 FOCADQ5VW36 1801 aa1.35□□□□□ -2.19
NF1-209ENST00000479536 TNRC6BQ9UPQ9 1833 aaKnown RBP1.35□□□□□ -2.19
NF1-209ENST00000479536 LRRK2Q5S007 2527 aa1.35□□□□□ -2.19
NF1-209ENST00000479536 HIVEP1P15822 2718 aa1.35□□□□□ -2.19
NF1-209ENST00000479536 USP9YO00507 2555 aaPredicted RBP1.35□□□□□ -2.19
NF1-209ENST00000479536 PDCD11Q14690 1871 aaKnown RBP1.35□□□□□ -2.19
NF1-209ENST00000479536 ZFC3H1O60293 1989 aaKnown RBP1.34□□□□□ -2.19
NF1-209ENST00000479536 NBASA2RRP1 2371 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 NBEAL2Q6ZNJ1 2754 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 TSC2P49815 1807 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 LAMA4Q16363 1823 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 SVEP1Q4LDE5 3571 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 A0A1W2PRE2 83 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 PFDN1O60925 122 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 HMGN1P05114 100 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
NF1-209ENST00000479536 PATE2Q6UY27 113 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 CROCCP2Q86T23 111 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 TAC4Q86UU9 113 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 CARD19Q96LW7 228 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 ZNF714Q96N38 554 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 C19orf12Q9NSK7 152 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 NUBP2Q9Y5Y2 271 aa1.34□□□□□ -2.19
NF1-209ENST00000479536 MTORP42345 2549 aa1.34□□□□□ -2.2
NF1-209ENST00000479536 ACACAQ13085 2346 aa1.34□□□□□ -2.2
NF1-209ENST00000479536 MYH8P13535 1937 aa1.34□□□□□ -2.2
NF1-209ENST00000479536 TGP01266 2768 aa1.34□□□□□ -2.2
NF1-209ENST00000479536 EPPK1P58107 5090 aaKnown RBP1.34□□□□□ -2.2
NF1-209ENST00000479536 ANK3Q12955 4377 aaKnown RBP1.33□□□□□ -2.2
NF1-209ENST00000479536 MYH1P12882 1939 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 CEP192Q8TEP8 1941 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 TRAV5A0A0B4J249 113 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 GNG14A0A1W2PPG7 69 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 K7ERJ3 54 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 DHFRP00374 187 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 ROMO1P60602 79 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 PLCXD2Q0VAA5 305 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 SPCS2Q15005 226 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 CLECL1Q8IZS7 167 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 OR4K15Q8NH41 348 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 TMEM254Q8TBM7 123 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 CGREF1Q99674 301 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 RETNLBQ9BQ08 111 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 CCDC32Q9BV29 185 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 RNF11Q9Y3C5 154 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 LY96Q9Y6Y9 160 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 GOLGA4Q13439 2230 aaKnown RBP1.33□□□□□ -2.2
NF1-209ENST00000479536 AHCTF1Q8WYP5 2266 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 ATRQ13535 2644 aa1.33□□□□□ -2.2
NF1-209ENST00000479536 PTPRDP23468 1912 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 NIPBLQ6KC79 2804 aaeCLIP1.32□□□□□ -2.2
NF1-209ENST00000479536 PCNX1Q96RV3 2341 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 DCHS2Q6V1P9 2916 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 KMT2CQ8NEZ4 4911 aaKnown RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 TRBV6-8A0A0A6YYG3 113 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 IGKV3D-7A0A0C4DH55 119 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 IGKV3OR2-268A0A0C4DH90 116 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 B4DSR2 109 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 E7EQ34 232 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 HIST1H2BKO60814 126 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 HYPMO75409 117 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 HIST1H2BJP06899 126 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 OR5D16Q8NGK9 328 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 PYDC1Q8WXC3 89 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 BORCS8Q96FH0 119 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 RMND5BQ96G75 393 aaPredicted RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 CACYBPQ9HB71 228 aaKnown RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 OTORQ9NRC9 128 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 ASB4Q9Y574 426 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 HIVEP3Q5T1R4 2406 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 URB1O60287 2271 aaKnown RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 EXPH5Q8NEV8 1989 aa1.32□□□□□ -2.2
NF1-209ENST00000479536 ROCK2O75116 1388 aaKnown RBP1.32□□□□□ -2.2
NF1-209ENST00000479536 PI4KAP42356 2102 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 PRKDCP78527 4128 aaKnown RBP1.31□□□□□ -2.2
NF1-209ENST00000479536 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 TACC2O95359 2948 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 TRDV1A0A1B0GX56 115 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 TCRBV4S1A1TA0A5B7 111 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 IGKV2-29A2NJV5 120 aaPredicted RBP1.31□□□□□ -2.2
NF1-209ENST00000479536 RER1O15258 196 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 HCRTO43612 131 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 NDUFA2O43678 99 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 CST7O76096 145 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 IFNA4P05014 189 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 OR10J4P0C629 311 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 ZNF93P35789 620 aaPredicted RBP1.31□□□□□ -2.2
NF1-209ENST00000479536 HBBP68871 147 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 KLRD1Q13241 179 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 PHF5AQ7RTV0 110 aaKnown RBP1.31□□□□□ -2.2
NF1-209ENST00000479536 PRR15Q8IV56 129 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 OR5D14Q8NGL3 314 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 GRPEL2Q8TAA5 225 aa1.31□□□□□ -2.2
NF1-209ENST00000479536 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms