RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 ANAPC13Q9BS18 74 aa8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 ZNF256Q9Y2P7 627 aaPredicted RBP8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 TLN1Q9Y490 2541 aaKnown RBP8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 COL6A6A6NMZ7 2263 aa8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 DUSP14O95147 198 aaKnown RBP8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 CREBBPQ92793 2442 aa8.22□□□□□ -1.09
ATP2C1-204ENST00000428331 SNCGO76070 127 aa8.21□□□□□ -1.09
ATP2C1-204ENST00000428331 CRYBA4P53673 196 aa8.21□□□□□ -1.09
ATP2C1-204ENST00000428331 ZNF56Q15929 161 aa8.21□□□□□ -1.09
ATP2C1-204ENST00000428331 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.09
ATP2C1-204ENST00000428331 SPTAN1Q13813 2472 aaKnown RBP8.21□□□□□ -1.09
ATP2C1-204ENST00000428331 TRAV26-1A0A087WT03 109 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 TSPAN13O95857 204 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 CD7P09564 240 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 CFAP126Q5VTH2 177 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 MED14OSP0DP75 135 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 GRNP28799 593 aaKnown RBP8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 MORN3Q6PF18 240 aaPredicted RBP8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 MOB4Q9Y3A3 225 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 ZFHX2Q9C0A1 2572 aaPredicted RBP8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 PRSS2P07478 247 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 ZNF688P0C7X2 276 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 FOXC1Q12948 553 aa8.21□□□□□ -1.1
ATP2C1-204ENST00000428331 WDFY4Q6ZS81 3184 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 C11orf86A6NJI1 115 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 GNRH2O43555 120 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 COX6CP09669 75 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 HERV-K104P63124 156 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 TMEM219Q86XT9 240 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 C10orf126Q8N4M7 172 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 C9JAW5 83 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 IGHV3-11P01762 117 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 J3QQQ9 107 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 NPFFO15130 113 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 TTC32Q5I0X7 151 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 NDUFA11Q86Y39 141 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 PTH2Q96A98 100 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 RAX2Q96IS3 184 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 WDFY3Q8IZQ1 3526 aa8.2□□□□□ -1.1
ATP2C1-204ENST00000428331 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 CENPVL3A0A0U1RRI6 287 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 NDUFA4O00483 81 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 BEX4Q9NWD9 120 aaPredicted RBP8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 A0A087WWL8 130 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 GAGE2EQ4V326 116 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 GAGE2DQ9UEU5 116 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 PRO0461Q9UI25 63 aa8.19□□□□□ -1.1
ATP2C1-204ENST00000428331 SLC25A20O43772 301 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 UBE2D1P51668 147 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 Q6ZUT4 128 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.18□□□□□ -1.15e-7■■■■□ 22.1
ATP2C1-204ENST00000428331 IGHV3OR16-10A0A075B7F0 116 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 A0A0J9YY99 117 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 IGF1P05019 195 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 Q6ZQT7 251 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 ZFP36P26651 326 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 FBXL19-AS1Q494R0 122 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 USMG5Q96IX5 58 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 RHPN1-AS1Q9BWJ2 59 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 SIRPDQ9H106 197 aa8.18□□□□□ -1.1
ATP2C1-204ENST00000428331 PRR9Q5T870 116 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 F6UB75 175 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 TCL1BO95988 128 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 ATXN8Q156A1 80 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 LY6EQ16553 131 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 U3KQE9 123 aa8.17□□□□□ -1.1
ATP2C1-204ENST00000428331 LINC01548A6NM66 108 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 IGHV3-64A0A075B6Q5 118 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 SLC25A29Q8N8R3 303 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 IGHV4-39P01824 125 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 CFC1BP0CG36 223 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 CFC1P0CG37 223 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 SRD5A1P18405 259 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 ZNF575Q86XF7 245 aa8.16□□□□□ -1.1
ATP2C1-204ENST00000428331 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 ANKRD11Q6UB99 2663 aaPredicted RBP8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 TRBV7-9A0A0J9YWB2 115 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 A4D1N5 150 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 IGKV3-20P01619 116 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 DEFB1P60022 68 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 SUMO4Q6EEV6 95 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 C5orf56Q8N8D9 126 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 UBE2D3P61077 147 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 UBE2D2P62837 147 aa8.15□□□□□ -1.1
ATP2C1-204ENST00000428331 SNRPD3P62318 126 aaKnown RBP8.15□□□□□ -1.11
ATP2C1-204ENST00000428331 PTPRQQ9UMZ3 2332 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms