RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 RASL11AQ6T310 242 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 ATP5L2Q7Z4Y8 100 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 NHLRC2Q8NBF2 726 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 OR2D3Q8NGH3 330 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 NDUFAF3Q9BU61 184 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 RNASE7Q9H1E1 156 aaKnown RBP6.77□□□□□ -1.33
CASC3-209ENST00000583902 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 SELENOKQ9Y6D0 94 aa6.77□□□□□ -1.33
CASC3-209ENST00000583902 IGHV1OR15-1A0A075B7D0 117 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 CRXO43186 299 aaPredicted RBP6.76□□□□□ -1.33
CASC3-209ENST00000583902 ORM1P02763 201 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 OR5AL1P0C617 328 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 CRIP1P50238 77 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 SPINK13Q1W4C9 94 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 Q6ZWC4 215 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 DEFB125Q8N687 156 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 BORCS7Q96B45 105 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 NEU1Q99519 415 aa6.76□□□□□ -1.33
CASC3-209ENST00000583902 M0R2Z0 102 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 ASIPP42127 132 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 ZNF80P51504 273 aaPredicted RBP6.75□□□□□ -1.33
CASC3-209ENST00000583902 CACNG7P62955 275 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 LINC00322Q6ZN03 302 aaPredicted RBP6.75□□□□□ -1.33
CASC3-209ENST00000583902 PTH2Q96A98 100 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 SPXQ9BT56 116 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 SSBP4Q9BWG4 385 aaPredicted RBP6.75□□□□□ -1.33
CASC3-209ENST00000583902 CNFNQ9BYD5 112 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 AURKAIP1Q9NWT8 199 aaPredicted RBP6.75□□□□□ -1.33
CASC3-209ENST00000583902 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 VWFP04275 2813 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 MGAM2Q2M2H8 2515 aa6.75□□□□□ -1.33
CASC3-209ENST00000583902 TRBV24-1A0A075B6N3 115 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 TRAV12-3A0A0B4J271 114 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 RBMY1BA6NDE4 496 aaKnown RBP6.74□□□□□ -1.33
CASC3-209ENST00000583902 RBMY1EA6NEQ0 496 aaKnown RBP6.74□□□□□ -1.33
CASC3-209ENST00000583902 IGKV3-20P01619 116 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 RBMY1DP0C7P1 496 aaKnown RBP6.74□□□□□ -1.33
CASC3-209ENST00000583902 IGHV4-30-4P0DP06 118 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 S100A4P26447 101 aaKnown RBP6.74□□□□□ -1.33
CASC3-209ENST00000583902 DEFB1P60022 68 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 KRTAP10-11P60412 298 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 FER1L6-AS1Q8NA97 138 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 LINC01587Q99440 93 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 TMEM208Q9BTX3 173 aa6.74□□□□□ -1.33
CASC3-209ENST00000583902 IGHV4-4A0A075B6R2 117 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 A0A1B0GUT8 65 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 HIGD1CA8MV81 97 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 G3V4G9 280 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 SNAI2O43623 268 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 CA1P00915 261 aaPredicted RBP6.73□□□□□ -1.33
CASC3-209ENST00000583902 TYMSP04818 313 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 CTRLP40313 264 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 RIGQ13278 110 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 ZNF124Q15973 351 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 PRR9Q5T870 116 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 ZNF705AQ6ZN79 300 aaPredicted RBP6.73□□□□□ -1.33
CASC3-209ENST00000583902 CSNK1G2-AS1Q8NCQ2 148 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 FRZBQ92765 325 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 XCL2Q9UBD3 114 aa6.73□□□□□ -1.33
CASC3-209ENST00000583902 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 TEX48A0A1B0GUV7 120 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 CBY3A6NI87 242 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 CIDEAO60543 219 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 MT-ND6P03923 174 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 GIG44P09565 113 aaPredicted RBP6.72□□□□□ -1.33
CASC3-209ENST00000583902 IGLC6P0CF74 106 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 RPL35AP18077 110 aaKnown RBP6.72□□□□□ -1.33
CASC3-209ENST00000583902 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 ATRAIDQ6UW56 229 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 TMEM263Q8WUH6 116 aaKnown RBP6.72□□□□□ -1.33
CASC3-209ENST00000583902 C16orf74Q96GX8 76 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 FBN3Q75N90 2809 aa6.72□□□□□ -1.33
CASC3-209ENST00000583902 J3KRW8 73 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 MIFP14174 115 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 FAM3BP58499 235 aaPredicted RBP6.71□□□□□ -1.34
CASC3-209ENST00000583902 ELOBQ15370 118 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 RRN3P1Q2M238 152 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 LGALS9BQ3B8N2 356 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 SMIM15Q7Z3B0 74 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 ZFP82Q8N141 532 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 SYT8Q8NBV8 401 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 RNF183Q96D59 192 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 RCHY1Q96PM5 261 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 WFDC10AQ9H1F0 79 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 NAGKQ9UJ70 344 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 PHLDA3Q9Y5J5 127 aa6.71□□□□□ -1.34
CASC3-209ENST00000583902 IGHV3-16A0A0C4DH30 117 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 NXPH4O95158 308 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 HLA-DQA1P01909 254 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 TRGC1P0CF51 173 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 TCL1AP56279 114 aa6.7□□□□□ -1.34
CASC3-209ENST00000583902 HBBP68871 147 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms