RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 Q86TA4 180 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 TRBV7-1A0A0A6YYK4 115 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 CLEC2BQ92478 149 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 IGHV3-16A0A0C4DH30 117 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 LMO1P25800 156 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 DKK4Q9UBT3 224 aa5.55□□□□□ -1.52
TGFBR3-210ENST00000533089 CNOT1A5YKK6 2376 aaKnown RBP5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 PLA2G5P39877 138 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 Q9HAA7 133 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 ZNF492Q9P255 531 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 RHOHQ15669 191 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 IGFL4Q6B9Z1 124 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 GVINP1Q7Z2Y8 2422 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 IGKV1-9A0A0C4DH69 117 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 MBD3L4A6NDZ8 208 aaPredicted RBP5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 MBD3L3A6NE82 208 aaPredicted RBP5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 MBD3L5A6NJ08 208 aaPredicted RBP5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 LINC00114Q6XXX2 140 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 C1orf159Q96HA4 380 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 CACNA1GO43497 2377 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 RALGAPA1Q6GYQ0 2036 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 VCYO14598 125 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 SAA4P35542 130 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 C6orf226Q5I0X4 101 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 IGFL3Q6UXB1 125 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 GGNQ86UU5 652 aa5.54□□□□□ -1.52
TGFBR3-210ENST00000533089 H3BT86 120 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 PSPNO60542 156 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 AGPAT4-IT1Q9H0P7 198 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 TRAV26-2A0A0B4J265 109 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 BUB1B-PAK6H3BSN5 160 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 ZFP2Q6ZN57 461 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 CD177Q8N6Q3 437 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 C14orf178Q8N769 122 aaPredicted RBP5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 IL15RAQ13261 267 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 Q8TAT8 98 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 FANCD2OSQ96PS1 177 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 MSMBP08118 114 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 EDN2P20800 178 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 LYPD2Q6UXB3 125 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 LY6G5BQ8NDX9 201 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 FAM223BA6NKX1 122 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 PRSS46E5RG02 174 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 FAM223AQ8IWN6 122 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 TMEM190Q8WZ59 177 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 USMG5Q96IX5 58 aa5.53□□□□□ -1.52
TGFBR3-210ENST00000533089 SRRM5B3KS81 715 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 DEFB131AP59861 70 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 SS18Q15532 418 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 Q6ZRM9 215 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 RHPN1-AS1Q9BWJ2 59 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 C15orf62A8K5M9 175 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 SERTAD4-AS1Q5TG53 156 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 YLPM1P49750 1951 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 DOCK8Q8NF50 2099 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 GAFA1Q96PS6 74 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 SERP1Q9Y6X1 66 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 PLXNA4Q9HCM2 1894 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 INTS1Q8N201 2190 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 OVOL3O00110 214 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 TMEM141Q96I45 108 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 ORMDL1Q9P0S3 153 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 XCL2Q9UBD3 114 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 SNURFQ9Y675 71 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 DIDO1Q9BTC0 2240 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 A0A087WWL8 130 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 LGALS9O00182 355 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 FRMD6-AS1P0C7T7 363 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 UBE2BP63146 152 aa5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 NYNRINQ9P2P1 1898 aaKnown RBP5.52□□□□□ -1.53
TGFBR3-210ENST00000533089 SPTBN2O15020 2390 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 LINC01619G3V211 115 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 C8orf49Q96NF6 230 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 YPEL4Q96NS1 127 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 HS3ST6Q96QI5 342 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 TEX36Q5VZQ5 186 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 C9orf139Q6ZV77 190 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 UPK3BQ9BT76 320 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 HEATR5AQ86XA9 2040 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 FAM186AA6NE01 2351 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 F8WDY8 70 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 HEATR1Q9H583 2144 aaKnown RBP5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 TRAV3A0A0B4J244 114 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 E7EQL1 145 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 ZNF561-AS1K7EIQ3 104 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 ETV2O00321 342 aaPredicted RBP5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 Q6Q795 121 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 SPRY4Q9C004 299 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 PRORYQ9H606 182 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 ZMAT4Q9H898 229 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 GATA1P15976 413 aaPredicted RBP5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 IGFBPL1Q8WX77 278 aa5.51□□□□□ -1.53
TGFBR3-210ENST00000533089 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms