RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 OR5AK2Q8NH90 309 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PLEKHB2Q96CS7 222 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PROK2Q9HC23 129 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 EYSQ5T1H1 3165 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.18□□□□□ -2.44
GYPB-209ENST00000508618 CFAP46Q8IYW2 2715 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 SPTBN2O15020 2390 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 CACNA1CQ13936 2221 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 CSMD3Q7Z407 3707 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 AHCTF1Q8WYP5 2266 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PLECQ15149 4684 aaKnown RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 DLEC1Q9Y238 1755 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 F8P00451 2351 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 WNK1Q9H4A3 2382 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 SPTA1P02549 2419 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 CEP250Q9BV73 2442 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 ANK3Q12955 4377 aaKnown RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 CEP295Q9C0D2 2601 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 H3BQV1 296 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 FXYD1O00168 92 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 KPNA4O00629 521 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 IGF2P01344 180 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 TRACP01848 142 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 S100A6P06703 90 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 NEDD8Q15843 81 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 RTL8BQ17RB0 113 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 Q5XG85 94 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 TCTEX1D1Q8N7M0 179 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 OR13C6PQ8NH95 151 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 DIRC1Q969H9 104 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 CIB3Q96Q77 187 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 GINS3Q9BRX5 216 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 C19orf12Q9NSK7 152 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 CDK12Q9NYV4 1490 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 NUP210Q8TEM1 1887 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 GCN1Q92616 2671 aaKnown RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 TLN2Q9Y4G6 2542 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 MYH1P12882 1939 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 VCANP13611 3396 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 UNC13BO14795 1591 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 EIF3AQ14152 1382 aaKnown RBP-0.19□□□□□ -2.44
GYPB-209ENST00000508618 A0A0C4DFX4 3053 aa-0.19□□□□□ -2.44
GYPB-209ENST00000508618 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.2□□□□□ -2.44
GYPB-209ENST00000508618 CHD6Q8TD26 2715 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 C5orf42Q9H799 3197 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 CSPG4Q6UVK1 2322 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 MCRIP1C9JLW8 97 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 IFNA1P01562 189 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 PPP1R2P41236 205 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 CAPZBP47756 277 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 NDUFA6P56556 154 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 DNAJB13P59910 316 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 FXYD3Q14802 87 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 MSMO1Q15800 293 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 HACD4Q5VWC8 232 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 C3orf62Q6ZUJ4 267 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 CROCCP2Q86T23 111 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 SZT2Q5T011 3432 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 DSPPQ9NZW4 1301 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 APC2O95996 2303 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 NF1P21359 2839 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 AKAP13Q12802 2813 aa-0.2□□□□□ -2.44
GYPB-209ENST00000508618 RELNP78509 3460 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 YTHDC2Q9H6S0 1430 aaKnown RBP-0.21□□□□□ -2.44
GYPB-209ENST00000508618 SACSQ9NZJ4 4579 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 MTORP42345 2549 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ABCA1O95477 2261 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 A0A096LNT2 108 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 LOC107984156A0A0G2JMH3 177 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 NBDYA0A0U1RRE5 68 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ARL5CA6NH57 179 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 E2F6O75461 281 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 MT-ND6P03923 174 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 SAA1P0DJI8 122 aaPredicted RBP-0.21□□□□□ -2.44
GYPB-209ENST00000508618 SNRPD3P62318 126 aaKnown RBP-0.21□□□□□ -2.44
GYPB-209ENST00000508618 POU6F1Q14863 301 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ZNF56Q15929 161 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 VMO1Q7Z5L0 202 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ARL17AQ8IVW1 177 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 C5orf56Q8N8D9 126 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 CHMP6Q96FZ7 201 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 CEP19Q96LK0 163 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 MKI67P46013 3256 aaKnown RBP-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ALMS1Q8TCU4 4167 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 CHD9Q3L8U1 2897 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 PRKDCP78527 4128 aaKnown RBP-0.21□□□□□ -2.44
GYPB-209ENST00000508618 ACACAQ13085 2346 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 PCNTO95613 3336 aa-0.21□□□□□ -2.44
GYPB-209ENST00000508618 KDM5CP41229 1560 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 LAMC3Q9Y6N6 1575 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 DMXL2Q8TDJ6 3036 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 C3orf85A0A1B0GTC6 90 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 A0A1W2PPB8 328 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 BBIP1A8MTZ0 92 aa-0.22□□□□□ -2.44
GYPB-209ENST00000508618 HIGD1CA8MV81 97 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms