RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 HIGD1AQ9Y241 93 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 ANKRD30AQ9BXX3 1397 aa0.44□□□□□ -2.34
HMGB1P30-201ENST00000492455 NAV3Q8IVL0 2385 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 USP54Q70EL1 1684 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 CTTNBP2Q8WZ74 1663 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 A0A0G2JMM0 328 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 PNMA8CA0A1B0GUJ8 204 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 HIST1H1BP16401 226 aaKnown RBP0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 CMPK1P30085 196 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 SPINT3P49223 89 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 FXYD3Q14802 87 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 TCTE3Q8IZS6 198 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 OR4S1Q8NGB4 309 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 PYDC1Q8WXC3 89 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 CALML5Q9NZT1 146 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 DNAJC15Q9Y5T4 150 aa0.43□□□□□ -2.34
HMGB1P30-201ENST00000492455 BORCS7-ASMTA0A0B4J1R7 106 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 HIGD1CA8MV81 97 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 TPST1O60507 370 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 CD3DP04234 171 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 SCGB1A1P11684 91 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 IL7P13232 177 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 EVI2AP22794 236 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 ZNF137PP52743 207 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 CCDC153Q494R4 210 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 GLYATL3Q5SZD4 288 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 DMAC1Q96GE9 116 aa0.42□□□□□ -2.34
HMGB1P30-201ENST00000492455 ABCA4P78363 2273 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 KIAA1549LQ6ZVL6 1849 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 ARHGAP31Q2M1Z3 1444 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 SMIM24O75264 130 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 DBIP07108 87 aaKnown RBP0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 HLA-DRB4P13762 266 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 ADCYAP1P18509 176 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 AKR1D1P51857 326 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 C6orf52Q5T4I8 152 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 C5orf56Q8N8D9 126 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 PPP1R1CQ8WVI7 109 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 ATG5Q9H1Y0 275 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 HLA-DRB4X5D2U9 266 aa0.41□□□□□ -2.34
HMGB1P30-201ENST00000492455 PTPRGP23470 1445 aa0.4□□□□□ -2.34
HMGB1P30-201ENST00000492455 ANK1P16157 1881 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 LY6G6CO95867 125 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 OR2H2O95918 312 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 APOC1P02654 83 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 PLGLB1Q02325 96 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 ZNF56Q15929 161 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 IQCJQ1A5X6 159 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 MORN2Q502X0 79 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 TSKUQ8WUA8 353 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 AIF1LQ9BQI0 150 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 BANF2Q9H503 90 aa0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 XIRP1Q702N8 1843 aaKnown RBP0.4□□□□□ -2.35
HMGB1P30-201ENST00000492455 CACNA1EQ15878 2313 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 CCKP06307 115 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 SPINK13Q1W4C9 94 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 SLC25A26Q70HW3 274 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 MAGOHBQ96A72 148 aaKnown RBP0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 VPS25Q9BRG1 176 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 FAM103A1Q9BTL3 118 aaKnown RBP0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 SLC35B3Q9H1N7 401 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 BATF3Q9NR55 127 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 MEGF8Q7Z7M0 2845 aa0.39□□□□□ -2.35
HMGB1P30-201ENST00000492455 WDR97A6NE52 1622 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 ABCA1O95477 2261 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 CPDO75976 1380 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 CXorf51AA0A1B0GTR3 108 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 POLR2JP52435 117 aaKnown RBP0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 SPINK7P58062 85 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 RPL37P61927 97 aaKnown RBP0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 UNQ5815/PRO19632Q6UWF5 114 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 MYH1P12882 1939 aa0.38□□□□□ -2.35
HMGB1P30-201ENST00000492455 BDP1A6H8Y1 2624 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 TRPM7Q96QT4 1865 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 ZCCHC6Q5VYS8 1495 aaKnown RBP0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 TRBV10-1A0A0K0K1A3 114 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 ARPC5O15511 151 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 PRH1P02810 166 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 ATP11AUNQ6ZP68 121 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 ATP6V0E2Q8NHE4 81 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 PPDPFLQ8WWR9 84 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 TAS2R8Q9NYW2 309 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 KIDINS220Q9ULH0 1771 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 ESPL1Q14674 2120 aa0.37□□□□□ -2.35
HMGB1P30-201ENST00000492455 TRAV2A0A0B4J234 112 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 TRAV17A0A0B4J275 112 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 LOC105371267A0A1B0GV96 52 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 FXYD1O00168 92 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 RBP4P02753 201 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 TFF1P04155 84 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 HIST1H1AQ02539 215 aaPredicted RBP0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 KLKP1Q107X0 134 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 ALX1Q15699 326 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 CLLU1Q5K131 121 aa0.36□□□□□ -2.35
HMGB1P30-201ENST00000492455 SNX29P2Q8IUI4 249 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms