RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 Q8TAT8 98 aa13.18□□□□□ -0.3
LINC00336-201ENST00000477984 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
LINC00336-201ENST00000477984 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
LINC00336-201ENST00000477984 CSMD1Q96PZ7 3565 aa13.17□□□□□ -0.3
LINC00336-201ENST00000477984 A0A1W2PPM0 123 aa13.17□□□□□ -0.3
LINC00336-201ENST00000477984 H3BUT2 72 aa13.17□□□□□ -0.3
LINC00336-201ENST00000477984 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
LINC00336-201ENST00000477984 PCP2Q8IVA1 136 aa13.17□□□□□ -0.3
LINC00336-201ENST00000477984 MRPL53Q96EL3 112 aaKnown RBP13.17□□□□□ -0.3
LINC00336-201ENST00000477984 SPTAN1Q13813 2472 aaKnown RBP13.16□□□□□ -0.3
LINC00336-201ENST00000477984 LRRK2Q5S007 2527 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 J3QKU1 62 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 ORM1P02763 201 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 NEGR1Q7Z3B1 354 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 IGLV2-18A0A075B6J9 118 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 J3QLI3 93 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 LEPP41159 167 aa13.16□□□□□ -0.3
LINC00336-201ENST00000477984 ARL3P36405 182 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 NMUP48645 174 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 FXYD7P58549 80 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 IGKCP01834 107 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 IGFL4Q6B9Z1 124 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 IL17RELQ6ZVW7 336 aa13.15□□□□□ -0.3
LINC00336-201ENST00000477984 SVEP1Q4LDE5 3571 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 G3V4G9 280 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 SMIM17P0DL12 118 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 BLCAPP62952 87 aa13.14□□□□□ -0.31
LINC00336-201ENST00000477984 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
LINC00336-201ENST00000477984 CRYBG3Q68DQ2 2970 aa13.13□□□□□ -0.31
LINC00336-201ENST00000477984 DPM2O94777 84 aa13.13□□□□□ -0.31
LINC00336-201ENST00000477984 TM2D2Q9BX73 214 aa13.13□□□□□ -0.31
LINC00336-201ENST00000477984 VPS13CQ709C8 3753 aa13.13□□□□□ -0.31
LINC00336-201ENST00000477984 NDUFA4O00483 81 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 ZNF207O43670 478 aaKnown RBP13.12□□□□□ -0.31
LINC00336-201ENST00000477984 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 FABP2P12104 132 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 TAL2Q16559 108 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 SPCS1Q9Y6A9 102 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 Q6ZS46 218 aa13.12□□□□□ -0.31
LINC00336-201ENST00000477984 IGHV3OR16-13A0A075B7E8 117 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 IGHV3-74A0A0B4J1X5 117 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 CFHR3Q02985 330 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 TMEM158Q8WZ71 300 aa13.11□□□□□ -0.31
LINC00336-201ENST00000477984 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 IGHV3-49A0A0A0MS15 119 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 TRAV8-2A0A0B4J237 113 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 PRAC2D3DTV9 90 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 TRBV12-3P01733 135 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 PRSS1P07477 247 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 ERCC8Q13216 396 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 DEFB112Q30KQ8 113 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 C8orf86Q6ZUL3 223 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 C18orf15Q96N68 181 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 CHAC1Q9BUX1 264 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 BEX4Q9NWD9 120 aaPredicted RBP13.1□□□□□ -0.31
LINC00336-201ENST00000477984 SAP30O75446 220 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 GAS8-AS1O95177 125 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 PF4V1P10720 104 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 KLK15Q9H2R5 256 aa13.1□□□□□ -0.31
LINC00336-201ENST00000477984 TGFAP01135 160 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 SAMD5Q5TGI4 173 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 C9orf47Q6ZRZ4 202 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 NRACQ8N912 160 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
LINC00336-201ENST00000477984 TRBV25-1A0A075B6N4 114 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 LINC01619G3V211 115 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 LAGE3Q14657 143 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 UNQ9165/PRO28630Q6UXU0 137 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 FOXC2Q99958 501 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 AGPAT4-IT1Q9H0P7 198 aa13.09□□□□□ -0.31
LINC00336-201ENST00000477984 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 IGHV4-59P01825 116 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 FXYD2P54710 66 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 WFDC3Q8IUB2 231 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 LRRC75A-AS1Q8N1F1 130 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
LINC00336-201ENST00000477984 KRTAP10-9P60411 292 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 TRAV12-1A0A0B4J245 112 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 RNF223E7ERA6 249 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 FSHBP01225 129 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 IGHV4-31P0DP07 118 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 DEFB113Q30KQ7 82 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 C9orf139Q6ZV77 190 aa13.07□□□□□ -0.32
LINC00336-201ENST00000477984 CEND1Q8N111 149 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms