RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 SH2D6Q7Z4S9 175 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 VMO1Q7Z5L0 202 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 DTX2Q86UW9 622 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 PSMB11A5LHX3 300 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 COX6CP09669 75 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 SEM1Q6ZVN7 128 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 TRBV25-1A0A075B6N4 114 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 TRAV21A0A0B4J279 112 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
USB1-212ENST00000566082 DLX4Q92988 240 aaPredicted RBP8.3□□□□□ -1.08
USB1-212ENST00000566082 IGLV2-23P01705 113 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 COL5A1P20908 1838 aaPredicted RBP8.29□□□□□ -1.08
USB1-212ENST00000566082 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 A8MWV9 139 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 SIVA1O15304 175 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 SPRY2O43597 315 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 SNCGO76070 127 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 TMEM219Q86XT9 240 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 BOD1L2Q8IYS8 172 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 NPFFR1Q9GZQ6 430 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 K7EIM0 57 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 PPP1R17O96001 155 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 CEND1Q8N111 149 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 Q8N8P6 123 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 I3L2K1 104 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 CD7P09564 240 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 PRTN3P24158 256 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
USB1-212ENST00000566082 TLN1Q9Y490 2541 aaKnown RBP8.28□□□□□ -1.08
USB1-212ENST00000566082 IGHV4-39P01824 125 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 WFDC2Q14508 124 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 SYT8Q8NBV8 401 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 SRSF8Q9BRL6 282 aaKnown RBP8.28□□□□□ -1.08
USB1-212ENST00000566082 CEACAM4O75871 244 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 PAX8Q06710 450 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 DYNAPQ8N1N2 210 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
USB1-212ENST00000566082 SLC25A16P16260 332 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 C12orf74Q32Q52 190 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 F8W1H4 67 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 C3orf36Q3SXR2 165 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 RAX2Q96IS3 184 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 INS-IGF2F8WCM5 200 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
USB1-212ENST00000566082 CRYGCP07315 174 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 PRR30Q53SZ7 412 aaPredicted RBP8.27□□□□□ -1.09
USB1-212ENST00000566082 NEGR1Q7Z3B1 354 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 TEX29Q8N6K0 151 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 DPF1Q92782 380 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 URB1-AS1Q96HZ7 61 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 DPH3P1Q9H4G8 78 aa8.27□□□□□ -1.09
USB1-212ENST00000566082 G3V318 75 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 PAPPA-AS1Q5QFB9 102 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 C22orf34Q6ZV56 151 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 TEX22C9J3V5 150 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
USB1-212ENST00000566082 PRADC1Q9BSG0 188 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 OTOGLQ3ZCN5 2332 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 C2CD3Q4AC94 2353 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 DSCAMO60469 2012 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 F8VRH5 84 aa8.26□□□□□ -1.09
USB1-212ENST00000566082 KAAG1Q9UBP8 84 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 A0A087WWL8 130 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 MYMXA0A1B0GTQ4 84 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 G3V4G9 280 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 CSPG4Q6UVK1 2322 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 CFHR4Q92496 578 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 VCX2Q9H322 139 aa8.25□□□□□ -1.09
USB1-212ENST00000566082 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 THBDP07204 575 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 GEMIN7Q9H840 131 aaKnown RBP8.24□□□□□ -1.09
USB1-212ENST00000566082 IGLL5B9A064 214 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 MYCNOSP40205 109 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 FOXE3Q13461 319 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 C8orf31Q8N9H6 132 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 AGPAT4-IT1Q9H0P7 198 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 PLA2G2CQ5R387 149 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 CLEC2AQ6UVW9 174 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
USB1-212ENST00000566082 TET2Q6N021 2002 aaPredicted RBP8.23□□□□□ -1.09
USB1-212ENST00000566082 HLA-DRB4P13762 266 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 C8orf86Q6ZUL3 223 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 HLA-DRB4X5D2U9 266 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 A0A087WX48 190 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 IGKV3D-20A0A0C4DH25 116 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 C9JAW5 83 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 NPC2P61916 151 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 RUSC1-AS1Q66K80 236 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 C9orf139Q6ZV77 190 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 ATP6V0BQ99437 205 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 ODF1Q14990 250 aa8.23□□□□□ -1.09
USB1-212ENST00000566082 C1orf122Q6ZSJ8 110 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms