RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 LYRM1O43325 122 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 IFNA7P01567 189 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 C1QBP02746 253 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 DIAPH2-AS1Q14236 149 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 IMPG1Q17R60 797 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 C1orf140Q5VVS0 124 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 SPAG11AQ6PDA7 123 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 RNF213Q63HN8 5207 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 DNAH2Q9P225 4427 aa-1.74□□□□□ -2.69
CASC4-211ENST00000561305 KIAA0100Q14667 2235 aaKnown RBP-1.75□□□□□ -2.69
CASC4-211ENST00000561305 PKD1P98161 4303 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 TRAV22A0A0B4J277 110 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 C9JAW5 83 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 IGF2P01344 180 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 SPINK8P0C7L1 97 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 NEDD8Q15843 81 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 UBE2DNLQ8IWF7 75 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 AP1S3Q96PC3 154 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 RREB1Q92766 1687 aa-1.75□□□□□ -2.69
CASC4-211ENST00000561305 PLECQ15149 4684 aaKnown RBP-1.75□□□□□ -2.69
CASC4-211ENST00000561305 VIRMAQ69YN4 1812 aaKnown RBP-1.75□□□□□ -2.69
CASC4-211ENST00000561305 URB1O60287 2271 aaKnown RBP-1.75□□□□□ -2.69
CASC4-211ENST00000561305 MYH9P35579 1960 aaKnown RBP-1.76□□□□□ -2.69
CASC4-211ENST00000561305 BICRAQ9NZM4 1560 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 GLRXP35754 106 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 GOLT1AQ6ZVE7 132 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 ASB4Q9Y574 426 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 CPDO75976 1380 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 MYO7BQ6PIF6 2116 aa-1.76□□□□□ -2.69
CASC4-211ENST00000561305 NUP210LQ5VU65 1888 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 TRPM7Q96QT4 1865 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 TRAV17A0A0B4J275 112 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 TNFP01375 233 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 IFNA4P05014 189 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 ARPP19P56211 112 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 EMX2Q04743 252 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 TMEM97Q5BJF2 176 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 HACD4Q5VWC8 232 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 CSAG1Q6PB30 78 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 LLPHQ9BRT6 129 aaKnown RBP-1.77□□□□□ -2.69
CASC4-211ENST00000561305 HTTP42858 3142 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 C10orf71Q711Q0 1435 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 CDK12Q9NYV4 1490 aaPredicted RBP-1.77□□□□□ -2.69
CASC4-211ENST00000561305 SPTBN4Q9H254 2564 aa-1.77□□□□□ -2.69
CASC4-211ENST00000561305 TEP1Q99973 2627 aaKnown RBP-1.77□□□□□ -2.69
CASC4-211ENST00000561305 RER1O15258 196 aa-1.78□□□□□ -2.69
CASC4-211ENST00000561305 NFYBP25208 207 aa-1.78□□□□□ -2.69
CASC4-211ENST00000561305 MRPL36Q9P0J6 103 aaKnown RBP-1.78□□□□□ -2.69
CASC4-211ENST00000561305 LAMA1P25391 3075 aa-1.78□□□□□ -2.69
CASC4-211ENST00000561305 NIPBLQ6KC79 2804 aaeCLIP-1.79□□□□□ -2.7
CASC4-211ENST00000561305 PLCE1Q9P212 2302 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 USF3Q68DE3 2245 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 HELZP42694 1942 aaKnown RBP-1.79□□□□□ -2.7
CASC4-211ENST00000561305 NCAPD3P42695 1498 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 CCDC144AA2RUR9 1427 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 K7ERJ3 54 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 TPM3P06753 285 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 PHBP35232 272 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 VMA21Q3ZAQ7 101 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 TRAPPC5Q8IUR0 188 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 MAP1LC3BQ9GZQ8 125 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 TMEM242Q9NWH2 141 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 COA4Q9NYJ1 87 aa-1.79□□□□□ -2.7
CASC4-211ENST00000561305 TRAV12-2A0A075B6T6 113 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 CXCL1P09341 107 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 PYYP10082 97 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 TMBIM6P55061 237 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 C3orf62Q6ZUJ4 267 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 ENY2Q9NPA8 101 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.8□□□□□ -2.7
CASC4-211ENST00000561305 DLEC1Q9Y238 1755 aa-1.8□□□□□ -2.7
CASC4-211ENST00000561305 SPG11Q96JI7 2443 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 KIAA1549LQ6ZVL6 1849 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 FAM74A4Q5TZK3 123 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 IZUMO2Q6UXV1 221 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 Q6ZRX8 168 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 PPP1R1CQ8WVI7 109 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 DMAC1Q96GE9 116 aa-1.81□□□□□ -2.7
CASC4-211ENST00000561305 N4BP2Q86UW6 1770 aaPredicted RBP-1.81□□□□□ -2.7
CASC4-211ENST00000561305 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.82□□□□□ -2.7
CASC4-211ENST00000561305 GCHFRP30047 84 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 FAM216BQ8N7L0 139 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 TMEM141Q96I45 108 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 CCDC42Q96M95 316 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 EFCAB11Q9BUY7 163 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 BET1LQ9NYM9 111 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 SPCS1Q9Y6A9 102 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 USP9XQ93008 2570 aaPredicted RBP-1.82□□□□□ -2.7
CASC4-211ENST00000561305 ANK1P16157 1881 aa-1.82□□□□□ -2.7
CASC4-211ENST00000561305 PLXNA1Q9UIW2 1896 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 TRAV5A0A0B4J249 113 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 HIST1H2BKO60814 126 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 HIST1H2BJP06899 126 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 INSL3P51460 131 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 ELOF1P60002 83 aaKnown RBP-1.83□□□□□ -2.7
CASC4-211ENST00000561305 TPM4P67936 248 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 TCTEX1D1Q8N7M0 179 aa-1.83□□□□□ -2.7
CASC4-211ENST00000561305 PRRC2CQ9Y520 2896 aaKnown RBP-1.84□□□□□ -2.7
CASC4-211ENST00000561305 KIDINS220Q9ULH0 1771 aa-1.84□□□□□ -2.7
CASC4-211ENST00000561305 TPST1O60507 370 aa-1.84□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms