RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 WDFY3Q8IZQ1 3526 aa5.88□□□□□ -1.47
SOX6-208ENST00000527619 DYSFO75923 2080 aa5.88□□□□□ -1.47
SOX6-208ENST00000527619 TRAV8-2A0A0B4J237 113 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 K7ENP7 123 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 IGHV3-48P01763 117 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 IGKV1-16P04430 117 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 CKS2P33552 79 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 ZNF672Q499Z4 452 aaPredicted RBP5.87□□□□□ -1.47
SOX6-208ENST00000527619 FAM19A1Q7Z5A9 133 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 APRG1Q8IVJ8 170 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 PRSS33Q8NF86 280 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 TMEM158Q8WZ71 300 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 LAMA1P25391 3075 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 TRBV7-3A0A075B6L6 115 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 NPYP01303 97 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 PRSS1P07477 247 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 FCER1GP30273 86 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 SUB1P53999 127 aaKnown RBP eCLIP5.87□□□□□ -1.47
SOX6-208ENST00000527619 TCF15Q12870 199 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 MAPKAPK5-AS1Q8N8E1 139 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 TMEM75Q8N9X5 138 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
SOX6-208ENST00000527619 MBD3L2Q8NHZ7 208 aaPredicted RBP5.87□□□□□ -1.47
SOX6-208ENST00000527619 MRPL36Q9P0J6 103 aaKnown RBP5.87□□□□□ -1.47
SOX6-208ENST00000527619 IGKV1D-17A0A075B6S4 117 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 LINC01546A6NGU7 62 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 LINC01619G3V211 115 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 HOXA3O43365 443 aaPredicted RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 IL4P05112 153 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 PFN2P35080 140 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 C17orf58Q2M2W7 97 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 MORN3Q6PF18 240 aaPredicted RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 LYZL1Q6UWQ5 148 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 FOXC2Q99958 501 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 SPANXDQ9BXN6 97 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 KNTC1P50748 2209 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 RIF1Q5UIP0 2472 aaKnown RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 SMKR1H3BMG3 65 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 J3QQQ9 107 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 CDX4O14627 284 aaPredicted RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 CGB3P0DN86 165 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 CGB7P0DN87 165 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 LEPP41159 167 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 MRPL53Q96EL3 112 aaKnown RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 Q96MF0 132 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 VKORC1Q9BQB6 163 aa5.86□□□□□ -1.47
SOX6-208ENST00000527619 ZFHX2Q9C0A1 2572 aaPredicted RBP5.86□□□□□ -1.47
SOX6-208ENST00000527619 GPR179Q6PRD1 2367 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 TNCP24821 2201 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 A8MWV9 139 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 J3QL48 77 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 OVOL1O14753 267 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 CD7P09564 240 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 MAGEA5P43359 124 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 PSMB2P49721 201 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 CRIP1P50238 77 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 TMEM258P61165 79 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 GUSBP11Q6P575 273 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 TMEM190Q8WZ59 177 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 TRGV9Q99603 122 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 PTPRZ1P23471 2315 aaPredicted RBP5.85□□□□□ -1.47
SOX6-208ENST00000527619 EP300Q09472 2414 aaPredicted RBP5.85□□□□□ -1.47
SOX6-208ENST00000527619 E7EUB6 86 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 FOLR3P41439 243 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 WT1-ASQ06250 92 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 FOXC1Q12948 553 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 ANKRD29Q8N6D5 301 aa5.85□□□□□ -1.47
SOX6-208ENST00000527619 TRAV40A0A0B4J280 105 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 NCBP2LA6PVI3 153 aaKnown RBP5.84□□□□□ -1.47
SOX6-208ENST00000527619 TRACP01848 142 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 LPAL2Q16609 132 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 ZNRF1Q8ND25 227 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 ZNF71Q9NQZ8 489 aaPredicted RBP5.84□□□□□ -1.47
SOX6-208ENST00000527619 TMEM14CQ9P0S9 112 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 HEATR1Q9H583 2144 aaKnown RBP5.84□□□□□ -1.47
SOX6-208ENST00000527619 FRYLO94915 3013 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 IGHV3OR15-7A0A075B7D8 119 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 SRRM5B3KS81 715 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 Q0VFX4 171 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
SOX6-208ENST00000527619 NXT2Q9NPJ8 142 aaKnown RBP5.84□□□□□ -1.47
SOX6-208ENST00000527619 AGRNO00468 2067 aa5.84□□□□□ -1.48
SOX6-208ENST00000527619 TRAV2A0A0B4J234 112 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 TMEM178BH3BS89 294 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 GHRHP01286 108 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 CRYGAP11844 174 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 SPINK14Q6IE38 97 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 DOCK7Q96N67 2140 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 SCGB1C2P0DMR2 95 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 SRSF9Q13242 221 aaKnown RBP eCLIP5.83□□□□□ -1.48
SOX6-208ENST00000527619 RUSC1-AS1Q66K80 236 aa5.83□□□□□ -1.48
SOX6-208ENST00000527619 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
SOX6-208ENST00000527619 LOC107984156A0A0G2JMH3 177 aa5.82□□□□□ -1.48
SOX6-208ENST00000527619 MYMXA0A1B0GTQ4 84 aa5.82□□□□□ -1.48
SOX6-208ENST00000527619 LINC01549A6NIU2 74 aa5.82□□□□□ -1.48
SOX6-208ENST00000527619 UBE2D3P61077 147 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms