RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 OR2H1Q9GZK4 316 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 PRNDQ9UKY0 176 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 RREB1Q92766 1687 aa-0.14□□□□□ -2.43
GYPB-209ENST00000508618 ABCA4P78363 2273 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ATRQ13535 2644 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 WDR87Q6ZQQ6 2873 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 DNAH7Q8WXX0 4024 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 LPAP08519 4548 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 CSMD1Q96PZ7 3565 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ATP5HO75947 161 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ATG12O94817 140 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 IFNA6P05013 189 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 GYPBP06028 91 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 CXCL1P09341 107 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 EVI2AP22794 236 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 RPL35P42766 123 aaKnown RBP-0.15□□□□□ -2.43
GYPB-209ENST00000508618 INSL3P51460 131 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 HBBP68871 147 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 RBM3P98179 157 aaKnown RBP-0.15□□□□□ -2.43
GYPB-209ENST00000508618 REEP5Q00765 189 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 DIAPH2-AS1Q14236 149 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 KRTAP19-7Q3SYF9 63 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 CASC2Q6XLA1 102 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 DEFB132Q7Z7B7 95 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ANGPTL5Q86XS5 388 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 AP1S3Q96PC3 154 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 EFCAB11Q9BUY7 163 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 LINC00846Q9NV44 126 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 SSR3Q9UNL2 185 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ASB4Q9Y574 426 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 LRRK2Q5S007 2527 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 UNC80Q8N2C7 3258 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 DCHS1Q96JQ0 3298 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 KDM5AP29375 1690 aaKnown RBP-0.15□□□□□ -2.43
GYPB-209ENST00000508618 ADGBQ8N7X0 1667 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 NBEAQ8NFP9 2946 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 NBPF19A0A087WUL8 3843 aa-0.15□□□□□ -2.43
GYPB-209ENST00000508618 NIPBLQ6KC79 2804 aaeCLIP-0.15□□□□□ -2.43
GYPB-209ENST00000508618 TNS1Q9HBL0 1735 aaKnown RBP-0.16□□□□□ -2.43
GYPB-209ENST00000508618 LAMA1P25391 3075 aa-0.16□□□□□ -2.43
GYPB-209ENST00000508618 MYH2Q9UKX2 1941 aa-0.16□□□□□ -2.43
GYPB-209ENST00000508618 FLGP20930 4061 aaPredicted RBP-0.16□□□□□ -2.43
GYPB-209ENST00000508618 K7ERJ3 54 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 RPS3P23396 243 aaKnown RBP eCLIP-0.16□□□□□ -2.443e-8■■■■■ 55.6
GYPB-209ENST00000508618 PHBP35232 272 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 MRPS36P82909 103 aaKnown RBP-0.16□□□□□ -2.44
GYPB-209ENST00000508618 IZUMO2Q6UXV1 221 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 ZCCHC23Q6ZST2 131 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 CCL4L1Q8NHW4 92 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 NEK7Q8TDX7 302 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 PHB2Q99623 299 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 MRPL35Q9NZE8 188 aaKnown RBP-0.16□□□□□ -2.44
GYPB-209ENST00000508618 LAMTOR3Q9UHA4 124 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 NAT8BQ9UHF3 227 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 TPRKBQ9Y3C4 175 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 TGP01266 2768 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 MYO9AB2RTY4 2548 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 TANC1Q9C0D5 1861 aa-0.16□□□□□ -2.44
GYPB-209ENST00000508618 DSPP15924 2871 aaKnown RBP-0.16□□□□□ -2.44
GYPB-209ENST00000508618 CUBNO60494 3623 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 TLN1Q9Y490 2541 aaKnown RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 TMEM210A6NLX4 147 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 CST7O76096 145 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 SPINK1P00995 79 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 SMR3BP02814 79 aaPredicted RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 HSD11B1P28845 292 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 MRPS25P82663 173 aaKnown RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 VMA21Q3ZAQ7 101 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 CCSMST1Q4G0I0 132 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 GLYATL3Q5SZD4 288 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 DHRS4L2Q6PKH6 230 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 OR4B1Q8NGF8 309 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 ISOC1Q96CN7 298 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 OR4C12Q96R67 309 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 PAIP2Q9BPZ3 127 aaKnown RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 PBDC1Q9BVG4 233 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 DNAH5Q8TE73 4624 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 SPEGQ15772 3267 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 CNOT1A5YKK6 2376 aaKnown RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 ASXL3Q9C0F0 2248 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 CELSR2Q9HCU4 2923 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 TEX15Q9BXT5 2789 aa-0.17□□□□□ -2.44
GYPB-209ENST00000508618 FLNBO75369 2602 aaKnown RBP-0.17□□□□□ -2.44
GYPB-209ENST00000508618 VPS13BQ7Z7G8 4022 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 PRRC2CQ9Y520 2896 aaKnown RBP-0.18□□□□□ -2.44
GYPB-209ENST00000508618 DNAH12Q6ZR08 3092 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 APOBP04114 4563 aaKnown RBP-0.18□□□□□ -2.44
GYPB-209ENST00000508618 TACC2O95359 2948 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 MYH3P11055 1940 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 TRAPPC8Q9Y2L5 1435 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 CSMD2Q7Z408 3487 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 A0A1W2PRS3 328 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 FABP4P15090 132 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 ARF6P62330 175 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 GNG5P63218 68 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 ESPL1Q14674 2120 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 ASB16-AS1Q495Z4 193 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 Q5BKY6 102 aa-0.18□□□□□ -2.44
GYPB-209ENST00000508618 MNS1Q8NEH6 495 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms