RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGKV1D-37A0A075B6S9 117 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A0A0B4J2C4 111 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRBV27A0A0K0K1C4 114 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A0A1W2PPM0 123 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A6NED7 52 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 APOC4-APOC2K7ER74 178 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 LECT2O14960 151 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 NUPR1O60356 82 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 CREBL2O60519 120 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 SNCGO76070 127 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 APOC2P02655 101 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGFBP7Q16270 282 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 MIC13Q5XKP0 118 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 LYZL2Q7Z4W2 148 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 ZFAND2AQ8N6M9 145 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR10P1Q8NGE3 313 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 TOMM6Q96B49 74 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABHD14BQ96IU4 210 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 CKLFQ9UBR5 152 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 V9GYH0 126 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 PIK3C2BO00750 1634 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 URB2Q14146 1524 aaKnown RBP2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH7BA7E2Y1 1941 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CDC42BPAQ5VT25 1732 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRGV5A0A0B4J1U4 118 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 IRGMA1A4Y4 181 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 UBE2L6O14933 153 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 SH2D1AO60880 128 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CST7O76096 145 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 COX7CP15954 63 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS3P17931 250 aaKnown RBP2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DMBP28068 263 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 FGF12P61328 243 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 SEC11AP67812 179 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 HBBP68871 147 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 BSPH1Q075Z2 132 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ELOBQ15370 118 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADIRFQ15847 76 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ETDBQ3ZM63 59 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRR9Q5T870 116 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 MORN4Q8NDC4 146 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR2T35Q8NGX2 323 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 AQP10Q96PS8 301 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 TNRC6AQ8NDV7 1962 aaKnown RBP2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ANKRD31Q8N7Z5 1873 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 EFCAB5A4FU69 1503 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADGRB3O60242 1522 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CITO14578 2027 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 COL1A1P02452 1464 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P13-201ENST00000406019 SYCP2Q9BX26 1530 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 HMSDA8MTL9 139 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 H3BUT2 72 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 GYPBP06028 91 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 RNASE4P34096 147 aaKnown RBP2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 DPPA3Q6W0C5 159 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 PHF5AQ7RTV0 110 aaKnown RBP2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 CLDND2Q8NHS1 167 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAM213BQ8TBF2 198 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 IMMP2LQ96T52 175 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 PMCHL2Q9BQD1 86 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC35B3Q9H1N7 401 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC39A9Q9NUM3 307 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 EPDR1Q9UM22 224 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 R4GN34 69 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 CACNA1DQ01668 2161 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SHANK1Q9Y566 2161 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 ANKARQ7Z5J8 1434 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 NWD2Q9ULI1 1742 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 C1orf167Q5SNV9 1468 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 HMGXB3Q12766 1538 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 A0A087WWC5 75 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 TRBV7-7A0A0K0K1E9 115 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 hADV29S1A0JD25 119 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 PROSCO94903 275 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ASIPP42127 132 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 DYNLT3P51808 116 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 NPC2P61916 151 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 C2orf50Q96LR7 162 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 DPH3P1Q9H4G8 78 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 TXNL4BQ9NX01 149 aaKnown RBP2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ANK1P16157 1881 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ADGRL1O94910 1474 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 CDK13Q14004 1512 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 TIAM1Q13009 1591 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 A0A1B0GU33 70 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SYS1-DBNDD2H3BUS1 97 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NDUFB3O43676 98 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF737O75373 536 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NDUFB2O95178 105 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 HBDP02042 147 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms