RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF138P52744 262 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 PRNTQ86SH4 94 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 TMEM190Q8WZ59 177 aa14.91□□□□□ -0.02
SSU72-204ENST00000378726 IGHV3OR16-13A0A075B7E8 117 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 LOC102724200A0A096LPH7 203 aaPredicted RBP14.9□□□□□ -0.02
SSU72-204ENST00000378726 IGHV3-74A0A0B4J1X5 117 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 IGLV2-11P01706 119 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 IGHG4P01861 327 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 PSG9Q00887 426 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 OR4C5Q8NGB2 326 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 hDV102S1A0JD36 115 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 M0R3E3 92 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 CHEK1O14757 476 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 LEPROTL1O95214 131 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 PRB4P10163 310 aaPredicted RBP14.9□□□□□ -0.02
SSU72-204ENST00000378726 TEX29Q8N6K0 151 aa14.9□□□□□ -0.02
SSU72-204ENST00000378726 FLNAP21333 2647 aaKnown RBP14.89□□□□□ -0.03
SSU72-204ENST00000378726 IGHV3-49A0A0A0MS15 119 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 ZNF785A8K8V0 405 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 PSMB8P28062 276 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 DUX5Q96PT3 197 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 ASCL2Q99929 193 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 NDFIP1Q9BT67 221 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 NPFFR1Q9GZQ6 430 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 C10orf99Q6UWK7 81 aa14.89□□□□□ -0.03
SSU72-204ENST00000378726 MCRIP2Q9BUT9 160 aaKnown RBP14.88□□□□□ -0.03
SSU72-204ENST00000378726 ZNF702PQ9H963 129 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 U3KQE9 123 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 FAM231BA6NCW3 169 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 K7EQM0 130 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 HAX1O00165 279 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 NDUFA4O00483 81 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 UNQ9165/PRO28630Q6UXU0 137 aa14.88□□□□□ -0.03
SSU72-204ENST00000378726 C16orf54Q6UWD8 224 aa14.87□□□□□ -0.03
SSU72-204ENST00000378726 ST20Q9HBF5 79 aa14.87□□□□□ -0.03
SSU72-204ENST00000378726 CSN1S1P47710 185 aa14.86□□□□□ -0.03
SSU72-204ENST00000378726 IGFL4Q6B9Z1 124 aa14.86□□□□□ -0.03
SSU72-204ENST00000378726 TMEM89A2RUT3 159 aa14.86□□□□□ -0.03
SSU72-204ENST00000378726 TMEM75Q8N9X5 138 aa14.86□□□□□ -0.03
SSU72-204ENST00000378726 ZC2HC1AQ96GY0 325 aa14.86□□□□□ -0.03
SSU72-204ENST00000378726 VAMP3Q15836 100 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 PEF1Q9UBV8 284 aaKnown RBP14.85□□□□□ -0.03
SSU72-204ENST00000378726 A0A087X0K7 114 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 TRBV6-1A0A0K0K1D8 114 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 CSN3P07498 182 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 PSG3Q16557 428 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 PSG8Q9UQ74 426 aa14.85□□□□□ -0.03
SSU72-204ENST00000378726 SONP18583 2426 aaKnown RBP14.84□□□□□ -0.03
SSU72-204ENST00000378726 KRTAP1-1Q07627 177 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 MPV17L2Q567V2 206 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 HECTD1Q9ULT8 2610 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 H0Y8G0 127 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 ARMS2P0C7Q2 107 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 HLA-DMBP28068 263 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 RPS20P60866 119 aaKnown RBP14.84□□□□□ -0.03
SSU72-204ENST00000378726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 TMEM191AQ9H0A3 160 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 YAE1D1Q9NRH1 226 aa14.84□□□□□ -0.03
SSU72-204ENST00000378726 CD5LO43866 347 aa14.83□□□□□ -0.04
SSU72-204ENST00000378726 PPBPP02775 128 aa14.83□□□□□ -0.04
SSU72-204ENST00000378726 RNF151Q2KHN1 245 aa14.83□□□□□ -0.04
SSU72-204ENST00000378726 MAP1LC3CQ9BXW4 147 aa14.83□□□□□ -0.04
SSU72-204ENST00000378726 TIMM8BQ9Y5J9 83 aaPredicted RBP14.83□□□□□ -0.04
SSU72-204ENST00000378726 AKAP9Q99996 3911 aa14.83□□□□□ -0.04
SSU72-204ENST00000378726 OR5AL1P0C617 328 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 A0A1B0GUT8 65 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 SERTM2A0A1B0GWG4 89 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 PET117Q6UWS5 81 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 ERASQ7Z444 233 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 PMCHL2Q9BQD1 86 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 FASNP49327 2511 aaKnown RBP14.82□□□□□ -0.04
SSU72-204ENST00000378726 ACANP16112 2415 aa14.82□□□□□ -0.04
SSU72-204ENST00000378726 CRIP1P50238 77 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 TMEM86BQ8N661 226 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 SCRT2Q9NQ03 307 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 ELANEP08246 267 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 FOXE3Q13461 319 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 SLC25A34Q6PIV7 304 aa14.81□□□□□ -0.04
SSU72-204ENST00000378726 HSBP1L1C9JCN9 74 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 NUDT3O95989 172 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 Q8N2B8 174 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 GLMPQ8WWB7 406 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 SLC50A1Q9BRV3 221 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 HSPB8Q9UJY1 196 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 IGKV2-40A0A087WW87 121 aaPredicted RBP14.8□□□□□ -0.04
SSU72-204ENST00000378726 IGKV2D-40P01614 121 aaPredicted RBP14.8□□□□□ -0.04
SSU72-204ENST00000378726 BVES-AS1Q5T3Y7 98 aa14.8□□□□□ -0.04
SSU72-204ENST00000378726 RIGQ13278 110 aa14.79□□□□□ -0.04
SSU72-204ENST00000378726 FAM106AQ4KMX7 169 aa14.79□□□□□ -0.04
SSU72-204ENST00000378726 TM4SF20Q53R12 229 aa14.79□□□□□ -0.04
SSU72-204ENST00000378726 RNF182Q8N6D2 247 aa14.79□□□□□ -0.04
SSU72-204ENST00000378726 C8orf86Q6ZUL3 223 aa14.78□□□□□ -0.04
SSU72-204ENST00000378726 TPPP3Q9BW30 176 aa14.78□□□□□ -0.04
SSU72-204ENST00000378726 TAX1BP3O14907 124 aa14.78□□□□□ -0.04
SSU72-204ENST00000378726 GPHB5Q86YW7 130 aa14.78□□□□□ -0.04
SSU72-204ENST00000378726 TRAV8-2A0A0B4J237 113 aa14.77□□□□□ -0.04
SSU72-204ENST00000378726 LINC01545Q5VT33 79 aa14.77□□□□□ -0.04
SSU72-204ENST00000378726 SMIM15Q7Z3B0 74 aa14.77□□□□□ -0.04
SSU72-204ENST00000378726 GATD1Q8NB37 220 aa14.77□□□□□ -0.04
SSU72-204ENST00000378726 C8orf49Q96NF6 230 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms