RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 IGLV3-9A0A075B6K5 115 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 I3L3M4 83 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 GATA4P43694 442 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 MYO7BQ6PIF6 2116 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 A0A087WX48 190 aa12.15□□□□□ -0.46
SHROOM4-201ENST00000289292 NOTCH4Q99466 2003 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 PFN2P35080 140 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 C11orf53Q8IXP5 236 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 PRO1854Q9UHT4 67 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 FOXE3Q13461 319 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
SHROOM4-201ENST00000289292 F6UB75 175 aa12.13□□□□□ -0.47
SHROOM4-201ENST00000289292 INS-IGF2F8WCM5 200 aa12.13□□□□□ -0.47
SHROOM4-201ENST00000289292 MRAPQ8TCY5 172 aa12.13□□□□□ -0.47
SHROOM4-201ENST00000289292 TANC1Q9C0D5 1861 aa12.13□□□□□ -0.47
SHROOM4-201ENST00000289292 NTN5Q8WTR8 489 aaPredicted RBP12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 COL4A3Q01955 1670 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 GNRH2O43555 120 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 GHRHP01286 108 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 SCRT2Q9NQ03 307 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 KIF26AQ9ULI4 1882 aaPredicted RBP12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 SIVA1O15304 175 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 CHD3Q12873 2000 aaKnown RBP12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 SSC4DQ8WTU2 575 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 SMIM2Q9BVW6 85 aa12.12□□□□□ -0.47
SHROOM4-201ENST00000289292 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 DENND4AQ7Z401 1863 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 IGLV1-44P01699 117 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 F8VRH5 84 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 WIPF2Q8TF74 440 aaPredicted RBP12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 TRACP01848 142 aa12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 COA6Q5JTJ3 125 aaKnown RBP12.11□□□□□ -0.47
SHROOM4-201ENST00000289292 B4DSR2 109 aa12.1□□□□□ -0.47
SHROOM4-201ENST00000289292 IGF2BP2-AS1Q96M15 143 aa12.1□□□□□ -0.47
SHROOM4-201ENST00000289292 SOCS3O14543 225 aa12.1□□□□□ -0.47
SHROOM4-201ENST00000289292 UBE2E1P51965 193 aa12.1□□□□□ -0.47
SHROOM4-201ENST00000289292 PI4KAP42356 2102 aa12.1□□□□□ -0.47
SHROOM4-201ENST00000289292 TRAV12-1A0A0B4J245 112 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 PYGO2Q9BRQ0 406 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 NDUFA12Q9UI09 145 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 CEP250Q9BV73 2442 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 ANKRD39Q53RE8 183 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 IGHV1OR15-1A0A075B7D0 117 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 K7EM74 188 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 DNAJC30Q96LL9 226 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 TAL2Q16559 108 aa12.09□□□□□ -0.47
SHROOM4-201ENST00000289292 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 LINC00311Q8N616 119 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 J3QQQ9 107 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 POLEQ07864 2286 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 TAX1BP3O14907 124 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 CTSZQ9UBR2 303 aa12.08□□□□□ -0.48
SHROOM4-201ENST00000289292 GAGE7O76087 117 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 NXPH4O95158 308 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 GAGE6Q13070 117 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 SS18Q15532 418 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 TMEM126AQ9H061 195 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 MSRB1Q9NZV6 116 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 PRSS29PA6NIE9 313 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 IGLL5B9A064 214 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 ARHGAP21Q5T5U3 1957 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 IGLV2-14P01704 120 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 TRIOBPQ9H2D6 2365 aa12.07□□□□□ -0.48
SHROOM4-201ENST00000289292 DTX1Q86Y01 620 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 KRTAP27-1Q3LI81 207 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 PRSS33Q8NF86 280 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 WFDC2Q14508 124 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 GTSF1Q8WW33 167 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 FAM215AQ9Y5M1 114 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 ANKRD29Q8N6D5 301 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 Q8NFD4 153 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 IGHV1-69P01742 117 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 CRYBA4P53673 196 aa12.06□□□□□ -0.48
SHROOM4-201ENST00000289292 PRB1P04280 392 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 CLPSL2Q6UWE3 100 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 A0A096LPF7 62 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 OBSL1O75147 1896 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
SHROOM4-201ENST00000289292 RNF223E7ERA6 249 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 SMIM20Q8N5G0 67 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms