RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 MGPP08493 103 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 PPBPP02775 128 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 SMIM17P0DL12 118 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 CEACAM3P40198 252 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 PAX2Q02962 417 aa13.11□□□□□ -0.31
SGPP1-201ENST00000247225 LINC01548A6NM66 108 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 S100A4P26447 101 aaKnown RBP13.1□□□□□ -0.31
SGPP1-201ENST00000247225 HIVEP3Q5T1R4 2406 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 NEGR1Q7Z3B1 354 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 TMEM219Q86XT9 240 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 MYOZ3Q8TDC0 251 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 TIMD4Q96H15 378 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 H3BMG7 143 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 CTSGP08311 255 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 C3orf36Q3SXR2 165 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 A0A1B0GW15 77 aa13.1□□□□□ -0.31
SGPP1-201ENST00000247225 SRD5A1P18405 259 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 Q8NA96 180 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 IGF1P05019 195 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 WFDC2Q14508 124 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 OR4X2Q8NGF9 303 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 OR9G4Q8NGQ1 327 aa13.09□□□□□ -0.31
SGPP1-201ENST00000247225 TRBV25-1A0A075B6N4 114 aa13.08□□□□□ -0.31
SGPP1-201ENST00000247225 ETDBQ3ZM63 59 aa13.08□□□□□ -0.31
SGPP1-201ENST00000247225 MAPKAPK5-AS1Q8N8E1 139 aa13.08□□□□□ -0.31
SGPP1-201ENST00000247225 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
SGPP1-201ENST00000247225 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 TNFRSF14Q92956 283 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 ARL3P36405 182 aa13.08□□□□□ -0.32
SGPP1-201ENST00000247225 CDSNQ15517 529 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 TMEM78Q5T7P6 136 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 VMO1Q7Z5L0 202 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 C8orf31Q8N9H6 132 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 CACNA1AO00555 2505 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
SGPP1-201ENST00000247225 ODF1Q14990 250 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 NPFFR1Q9GZQ6 430 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 AGPAT4-IT1Q9H0P7 198 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 DPM2O94777 84 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
SGPP1-201ENST00000247225 ZNF562Q6V9R5 426 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 UBTD1Q9HAC8 227 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 NACAE9PAV3 2078 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 F8W735 103 aaPredicted RBP13.06□□□□□ -0.32
SGPP1-201ENST00000247225 ZNF493Q6ZR52 646 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 C16orf92Q96LL3 132 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 POLQO75417 2590 aa13.06□□□□□ -0.32
SGPP1-201ENST00000247225 TLN2Q9Y4G6 2542 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 IGHV3-11P01762 117 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 C16orf54Q6UWD8 224 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 PTPN13Q12923 2485 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
SGPP1-201ENST00000247225 IGKV3D-20A0A0C4DH25 116 aa13.04□□□□□ -0.32
SGPP1-201ENST00000247225 SCGB1D4Q6XE38 83 aa13.04□□□□□ -0.32
SGPP1-201ENST00000247225 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
SGPP1-201ENST00000247225 Q5PR19 223 aa13.04□□□□□ -0.32
SGPP1-201ENST00000247225 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
SGPP1-201ENST00000247225 ZNF479Q96JC4 524 aa13.04□□□□□ -0.32
SGPP1-201ENST00000247225 G3V4G9 280 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 ATP6V0E1O15342 81 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 TSSC4Q9Y5U2 329 aaPredicted RBP13.03□□□□□ -0.32
SGPP1-201ENST00000247225 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 FAM208BQ5VWN6 2430 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.03□□□□□ -0.32
SGPP1-201ENST00000247225 IGHG4P01861 327 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 PDE6HQ13956 83 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 ZFHX3Q15911 3703 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 F6UB75 175 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
SGPP1-201ENST00000247225 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
SGPP1-201ENST00000247225 LY6LH3BQJ8 138 aa13.02□□□□□ -0.32
SGPP1-201ENST00000247225 APOMO95445 188 aa13.02□□□□□ -0.32
SGPP1-201ENST00000247225 IGKV3-20P01619 116 aa13.02□□□□□ -0.32
SGPP1-201ENST00000247225 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
SGPP1-201ENST00000247225 NXT2Q9NPJ8 142 aaKnown RBP13.02□□□□□ -0.33
SGPP1-201ENST00000247225 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
SGPP1-201ENST00000247225 ZFP36P26651 326 aaKnown RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 SRSF9Q13242 221 aaKnown RBP eCLIP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 ZNF418Q8TF45 676 aaPredicted RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 RPL39LQ96EH5 51 aaKnown RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 SCGB3A1Q96QR1 104 aa13.01□□□□□ -0.33
SGPP1-201ENST00000247225 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
SGPP1-201ENST00000247225 HRNRQ86YZ3 2850 aaPredicted RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 LY6EQ16553 131 aa13.01□□□□□ -0.33
SGPP1-201ENST00000247225 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
SGPP1-201ENST00000247225 WNK1Q9H4A3 2382 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 F5H697 171 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 IGLC6P0CF74 106 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms