RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 J3KRW8 73 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 S100A9P06702 114 aaKnown RBP4.73□□□□□ -1.65
CLK1-210ENST00000473565 TFPI2P48307 235 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 CAMPP49913 170 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 MUC21Q5SSG8 566 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 C1orf194Q5T5A4 169 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 GDF5OSQ5U4N7 250 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 MRPL18Q9H0U6 180 aaKnown RBP4.73□□□□□ -1.65
CLK1-210ENST00000473565 AGRNO00468 2067 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
CLK1-210ENST00000473565 C2CD3Q4AC94 2353 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 UBE2CO00762 179 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 SLURP1P55000 103 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 FOXE3Q13461 319 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 PRR25Q96S07 402 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 ATP6V0BQ99437 205 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 TPPP3Q9BW30 176 aa4.73□□□□□ -1.65
CLK1-210ENST00000473565 SSBP4Q9BWG4 385 aaPredicted RBP4.73□□□□□ -1.65
CLK1-210ENST00000473565 DAZ1Q9NQZ3 744 aaKnown RBP4.73□□□□□ -1.65
CLK1-210ENST00000473565 VWFP04275 2813 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 TMEM213A2RRL7 107 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 XKRY2A2RUG3 117 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 F2Z2F3 143 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 LGALS1P09382 135 aaKnown RBP4.72□□□□□ -1.65
CLK1-210ENST00000473565 HOXD3P31249 432 aaPredicted RBP4.72□□□□□ -1.65
CLK1-210ENST00000473565 FAM209BQ5JX69 171 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 AGPAT4-IT1Q9H0P7 198 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ZNF492Q9P255 531 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 NAT8BQ9UHF3 227 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 SMPXQ9UHP9 88 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ZNF580Q9UK33 172 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 A0A1W2PRX2 142 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 IZUMO1RA6ND01 250 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 SH2D1AO60880 128 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ELANEP08246 267 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 S100A7P31151 101 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 FAM106AQ4KMX7 169 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 TMEM136Q6ZRR5 245 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ZNF738Q8NE65 137 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 SLC50A1Q9BRV3 221 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ZFP30Q9Y2G7 519 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 HAX1O00165 279 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 ZNF253O75346 499 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 LY6G6DO95868 133 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 HOXA5P20719 270 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 MYOZ3Q8TDC0 251 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 WFDC12Q8WWY7 111 aa4.72□□□□□ -1.65
CLK1-210ENST00000473565 TRBV6-1A0A0K0K1D8 114 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 SOCS3O14543 225 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 NUPR1O60356 82 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 CT45A10P0DMU9 189 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 SLAQ13239 276 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 Q8N2B8 174 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 TMEM256Q8N2U0 113 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 SMIM12Q96EX1 92 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 F8P00451 2351 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 A8MWL6 223 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 NPIPB6E9PJ23 425 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 KIR3DS1Q14943 382 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 UBE2E2Q96LR5 201 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 NRN1Q9NPD7 142 aa4.71□□□□□ -1.66
CLK1-210ENST00000473565 A0A1W2PS18 150 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 TMEM89A2RUT3 159 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 FABP4P15090 132 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 CD33P20138 364 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 CDX1P47902 265 aaPredicted RBP4.7□□□□□ -1.66
CLK1-210ENST00000473565 PRR9Q5T870 116 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 KLHL30-AS1Q8NEE0 82 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 OR11H1Q8NG94 326 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 ATRQ13535 2644 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 TRAV9-1A0A075B6T8 112 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 ARMS2P0C7Q2 107 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 CD28P10747 220 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 HIST1H1AQ02539 215 aaPredicted RBP4.7□□□□□ -1.66
CLK1-210ENST00000473565 FAM162BQ5T6X4 162 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 ADAMTSL5Q6ZMM2 481 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 TMEM86BQ8N661 226 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
CLK1-210ENST00000473565 TP53TG3Q9ULZ0 132 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 NOTCH3Q9UM47 2321 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 SERTM2A0A1B0GWG4 89 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 TMEM189A5PLL7 270 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 ORM1P02763 201 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 ZNF688P0C7X2 276 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 SRIP30626 198 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 FOXA3P55318 350 aaPredicted RBP4.7□□□□□ -1.66
CLK1-210ENST00000473565 SAPCD1Q5SSQ6 148 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 TMEM78Q5T7P6 136 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 RNF152Q8N8N0 203 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 OR10D4PQ8NGN7 298 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 GNB1LQ9BYB4 327 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 UFC1Q9Y3C8 167 aa4.7□□□□□ -1.66
CLK1-210ENST00000473565 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 C2orf70A6NJV1 201 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 INAFM1C9JVW0 142 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 K7EMT4 169 aa4.69□□□□□ -1.66
CLK1-210ENST00000473565 SPRY2O43597 315 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms