RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MBD3L2Q8NHZ7 208 aaPredicted RBP6.81□□□□□ -1.32
CHD8-201ENST00000399982 ORMDL1Q9P0S3 153 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 CHCHD2Q9Y6H1 151 aaPredicted RBP6.81□□□□□ -1.32
CHD8-201ENST00000399982 VMO1Q7Z5L0 202 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 MYLKQ15746 1914 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 IGHV3-38A0A0C4DH36 116 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 F6UB75 175 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 PSPNO60542 156 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 COX6A1P12074 109 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 SIGLEC9Q9Y336 463 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 IGKV1D-8A0A087WSZ0 117 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 A0A1W2PR77 199 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 UBE2AP49459 152 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 TIRAPP58753 221 aa6.81□□□□□ -1.32
CHD8-201ENST00000399982 DKK1O94907 266 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 APOC4P55056 127 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 WFDC11Q8NEX6 87 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 IGFBPL1Q8WX77 278 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 LYZL4Q96KX0 146 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 A0A0B4J2C4 111 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 LYNX1G3V0Z9 82 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 LYNX1P0DP58 116 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 TRBV7-1A0A0A6YYK4 115 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 XCL2Q9UBD3 114 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 PARP14Q460N5 1801 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 H3BT86 120 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 CFC1BP0CG36 223 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 CFC1P0CG37 223 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 RNASE8Q8TDE3 154 aaKnown RBP6.8□□□□□ -1.32
CHD8-201ENST00000399982 CACNA1IQ9P0X4 2223 aa6.8□□□□□ -1.32
CHD8-201ENST00000399982 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 ZCCHC24Q8N2G6 241 aaKnown RBP6.79□□□□□ -1.32
CHD8-201ENST00000399982 Q8TAT8 98 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 SHANK2-AS3Q9BTD1 123 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 CELA3AP09093 270 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 PSME4Q14997 1843 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 IGHV1-69DA0A0B4J2H0 117 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 IGFL4Q6B9Z1 124 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 NTF4P34130 210 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 SPACA3Q8IXA5 215 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 IGKV1D-43A0A0B4J1Z2 117 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 NTN3O00634 580 aaPredicted RBP6.79□□□□□ -1.32
CHD8-201ENST00000399982 PAX9P55771 341 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 HS3ST6Q96QI5 342 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 SDK2Q58EX2 2172 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 FOXF2Q12947 444 aa6.79□□□□□ -1.32
CHD8-201ENST00000399982 DOCK4Q8N1I0 1966 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 IGLV3-12A0A075B6K2 115 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 SRRM5B3KS81 715 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 PNRC2Q9NPJ4 139 aaKnown RBP6.78□□□□□ -1.32
CHD8-201ENST00000399982 H0YGX0 51 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 ZNF747Q9BV97 191 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 IGLL5B9A064 214 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 CECR9P0C854 216 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
CHD8-201ENST00000399982 TNRC6AQ8NDV7 1962 aaKnown RBP6.78□□□□□ -1.32
CHD8-201ENST00000399982 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 IGHV1OR15-1A0A075B7D0 117 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 XCL1P47992 114 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 FOXI1Q12951 378 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 LY6DQ14210 128 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 GREB1Q4ZG55 1949 aa6.78□□□□□ -1.32
CHD8-201ENST00000399982 FOXE3Q13461 319 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 MINOS1Q5TGZ0 78 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 MINOS1-NBL1R4GNA1 71 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 MED12Q93074 2177 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 NTN5Q8WTR8 489 aaPredicted RBP6.77□□□□□ -1.33
CHD8-201ENST00000399982 CFHR4Q92496 578 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 TRAV26-1A0A087WT03 109 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 C17orf100A8MU93 164 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 DEFB131AP59861 70 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 SEM1Q6ZVN7 128 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 COL18A1P39060 1754 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 TFF1P04155 84 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 ARMS2P0C7Q2 107 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 RHOHQ15669 191 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 BRD3OSQ6XYD6 125 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 KLK9Q9UKQ9 250 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 TNRC6BQ9UPQ9 1833 aaKnown RBP6.77□□□□□ -1.33
CHD8-201ENST00000399982 TSC2P49815 1807 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 A0A0U1RQV1 116 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 I3L3M4 83 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 UQCRQO14949 82 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 PSMB8P28062 276 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 PRSS57Q6UWY2 283 aa6.77□□□□□ -1.33
CHD8-201ENST00000399982 IGLV2-23P01705 113 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 RNASE6Q93091 150 aaKnown RBP6.76□□□□□ -1.33
CHD8-201ENST00000399982 USMG5Q96IX5 58 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 J3QQQ9 107 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
CHD8-201ENST00000399982 FOXL2NBQ6ZUU3 175 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 IGHV4-59P01825 116 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 PRR15LQ9BU68 103 aa6.76□□□□□ -1.33
CHD8-201ENST00000399982 ABCA4P78363 2273 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms