RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 OR8J2Q8NGG1 315 aa-0.72□□□□□ -2.52
RNU4-28P-201ENST00000364739 LYSTQ99698 3801 aa-0.72□□□□□ -2.52
RNU4-28P-201ENST00000364739 ENY2Q9NPA8 101 aa-0.72□□□□□ -2.52
RNU4-28P-201ENST00000364739 FAM32AQ9Y421 112 aaKnown RBP-0.72□□□□□ -2.52
RNU4-28P-201ENST00000364739 ITPR2Q14571 2701 aa-0.72□□□□□ -2.52
RNU4-28P-201ENST00000364739 ATRQ13535 2644 aa-0.72□□□□□ -2.53
RNU4-28P-201ENST00000364739 TRPM7Q96QT4 1865 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 PKHD1P08F94 4074 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 GCN1Q92616 2671 aaKnown RBP-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 TRPM1Q7Z4N2 1603 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 IGHV3-33P01772 117 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 TMBIM6P55061 237 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 GLYATL3Q5SZD4 288 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 ZCCHC23Q6ZST2 131 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 CACYBPQ9HB71 228 aaKnown RBP-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 C2CD3Q4AC94 2353 aa-0.73□□□□□ -2.53
RNU4-28P-201ENST00000364739 MUC17Q685J3 4493 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 ITPR1Q14643 2758 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 DNAH6Q9C0G6 4158 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 FRMPD1Q5SYB0 1578 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 DNAH3Q8TD57 4116 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 IDO1P14902 403 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 INSL3P51460 131 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 RPL37P61927 97 aaKnown RBP-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 KLK9Q2XQG4 91 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 KRTAP19-6Q3LI70 58 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 ANGPTL5Q86XS5 388 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 C10orf111Q8N326 155 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 OR10X1Q8NGY0 326 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 PPTC7Q8NI37 304 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 BTF3L4Q96K17 158 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 LPAR5Q9H1C0 372 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 PROK2Q9HC23 129 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 PCNX1Q96RV3 2341 aa-0.74□□□□□ -2.53
RNU4-28P-201ENST00000364739 SVEP1Q4LDE5 3571 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 SPTBN2O15020 2390 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 PRORSD1PA6NEY8 169 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 LIN52Q52LA3 116 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 NMNAT1Q9HAN9 279 aaPredicted RBP-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 ASB4Q9Y574 426 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 PKHD1L1Q86WI1 4243 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 WNK1Q9H4A3 2382 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 DNAH2Q9P225 4427 aa-0.75□□□□□ -2.53
RNU4-28P-201ENST00000364739 A0A0J9YY99 117 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 RER1O15258 196 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 CYBAP13498 195 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 SPRR2BP35325 72 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 SPINK13Q1W4C9 94 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 PPP1R14BQ96C90 147 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 ALMS1Q8TCU4 4167 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 ADGRL3Q9HAR2 1447 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 ABCA1O95477 2261 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 MTORP42345 2549 aa-0.76□□□□□ -2.53
RNU4-28P-201ENST00000364739 ANK1P16157 1881 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 NIPSNAP2O75323 286 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 MSMO1Q15800 293 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 IFT20Q8IY31 132 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 PLEKHB2Q96CS7 222 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 SRCAPQ6ZRS2 3230 aa-0.77□□□□□ -2.53
RNU4-28P-201ENST00000364739 PCF11O94913 1555 aaKnown RBP-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 MYO15AQ9UKN7 3530 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 PLB1Q6P1J6 1458 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 A0A1W2PRS3 328 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 TMEM114B3SHH9 223 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 SULT1C4O75897 302 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 DIAPH2-AS1Q14236 149 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 ESPL1Q14674 2120 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 VMA21Q3ZAQ7 101 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 NAT8BQ9UHF3 227 aa-0.78□□□□□ -2.53
RNU4-28P-201ENST00000364739 CADP27708 2225 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 TEX15Q9BXT5 2789 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 EYSQ5T1H1 3165 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 DMXL2Q8TDJ6 3036 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 TACC2O95359 2948 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 SPRR2EP22531 72 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 NEDD8Q15843 81 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 ZNF56Q15929 161 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 XAF1Q6GPH4 301 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 LINC00208Q96KT6 92 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 MAP1LC3BQ9GZQ8 125 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 CST11Q9H112 138 aa-0.79□□□□□ -2.54
RNU4-28P-201ENST00000364739 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 URB1O60287 2271 aaKnown RBP-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 AFDNP55196 1824 aaKnown RBP-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 MYO7AQ13402 2215 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 PI4KAP42356 2102 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 PKD1L1Q8TDX9 2849 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 IFITM1P13164 125 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 NCALDP61601 193 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 DEFA5Q01523 94 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 KRTAP6-2Q3LI66 62 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 PRAP1Q96NZ9 151 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 ANK3Q12955 4377 aaKnown RBP-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 NISCHQ9Y2I1 1504 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 LRRK2Q5S007 2527 aa-0.8□□□□□ -2.54
RNU4-28P-201ENST00000364739 CHD9Q3L8U1 2897 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 A0A0C4DFX4 3053 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 TNFP01375 233 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 IFNA4P05014 189 aa-0.81□□□□□ -2.54
RNU4-28P-201ENST00000364739 RPS3P23396 243 aaKnown RBP eCLIP-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms